RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 ZNF740Q8NDX6 193 aa19.37■□□□□ 0.69
PTCD3-206ENST00000465560 MR1Q95460 341 aa19.37■□□□□ 0.69
PTCD3-206ENST00000465560 KIAA1143Q96AT1 154 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-206ENST00000465560 PHF21BQ96EK2 531 aa19.37■□□□□ 0.69
PTCD3-206ENST00000465560 WDR34Q96EX3 536 aa19.37■□□□□ 0.69
PTCD3-206ENST00000465560 AKIRIN1Q9H9L7 192 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-206ENST00000465560 GEMIN8Q9NWZ8 242 aaKnown RBP19.37■□□□□ 0.69
PTCD3-206ENST00000465560 CROTQ9UKG9 612 aa19.37■□□□□ 0.69
PTCD3-206ENST00000465560 A0A1B0GX78 115 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 TERTO14746 1132 aaKnown RBP19.36■□□□□ 0.69
PTCD3-206ENST00000465560 DSCR3O14972 297 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 OR1F1O43749 312 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 PRAMEF4O60810 478 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 SIX3O95343 332 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-206ENST00000465560 EPB42P16452 691 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 CXCR2P25025 360 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 CRHR1P34998 444 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 CCT5P48643 541 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 SLC18A2Q05940 514 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 PCDH1Q08174 1060 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 E2F2Q14209 437 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 SLBPQ14493 270 aaKnown RBP eCLIP19.36■□□□□ 0.69
PTCD3-206ENST00000465560 KRT71Q3SY84 523 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 C1orf189Q5VU69 101 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 GARNL3Q5VVW2 1013 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 PRAMEF9Q5VWM5 478 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 TTLL10Q6ZVT0 673 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 ASPGQ86U10 573 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 C4orf33Q8N1A6 199 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 ARHGEF39Q8N4T4 335 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 CAMKVQ8NCB2 501 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 CT55Q8WUE5 264 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 HNRNPLLQ8WVV9 542 aaKnown RBP19.36■□□□□ 0.69
PTCD3-206ENST00000465560 TM4SF19Q96DZ7 209 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 C10orf90Q96M02 699 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 ZIM3Q96PE6 472 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 EFHD1Q9BUP0 239 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 NLNQ9BYT8 704 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 CHST8Q9H2A9 424 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 GPN2Q9H9Y4 310 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-206ENST00000465560 COPG2Q9UBF2 871 aa19.36■□□□□ 0.69
PTCD3-206ENST00000465560 LRRC14BA6NHZ5 514 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 A8MT66 165 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 C21orf140B9A014 251 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 E2F3O00716 465 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 COPEO14579 308 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 H2AFYO75367 372 aaKnown RBP19.35■□□□□ 0.69
PTCD3-206ENST00000465560 MED26O95402 600 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 TCN2P20062 427 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 TAC1P20366 129 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 AGXTP21549 392 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 EEF1DP29692 281 aaKnown RBP19.35■□□□□ 0.69
PTCD3-206ENST00000465560 AHRP35869 848 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 DLSTP36957 453 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 PIK3CGP48736 1102 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 TMPRSS3P57727 454 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 NFKB2Q00653 900 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 TBCCQ15814 346 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 MUM1Q2TAK8 710 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 XKR6Q5GH73 641 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 LCN10Q6JVE6 187 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 FAM199XQ6PEV8 388 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-206ENST00000465560 TEX9Q8N6V9 391 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 PTCD3Q96EY7 689 aaKnown RBP19.35■□□□□ 0.69
PTCD3-206ENST00000465560 EFCAB11Q9BUY7 163 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 PITHD1Q9GZP4 211 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-206ENST00000465560 MKS1Q9NXB0 559 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 ZFP69BQ9UJL9 534 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 EMCNQ9ULC0 261 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 ANGPTL3Q9Y5C1 460 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 DSPP15924 2871 aaKnown RBP19.35■□□□□ 0.69
PTCD3-206ENST00000465560 SCN3AQ9NY46 2000 aa19.35■□□□□ 0.69
PTCD3-206ENST00000465560 KATNA1O75449 491 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 STATHP02808 62 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 SLC35G6P0C7Q6 338 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 ALAS2P22557 587 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 CASP2P42575 452 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 DCDP81605 110 aaKnown RBP19.34■□□□□ 0.69
PTCD3-206ENST00000465560 IRF8Q02556 426 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 CHIT1Q13231 466 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 DNASE1L3Q13609 305 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 GTF2H2Q13888 395 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 COL9A2Q14055 689 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-206ENST00000465560 DOC2AQ14183 400 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 GTF2H2CQ6P1K8 395 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 FAM198BQ6UWH4 519 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 GOLGA7Q7Z5G4 137 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 SRRM1Q8IYB3 904 aaKnown RBP19.34■□□□□ 0.69
PTCD3-206ENST00000465560 KRT78Q8N1N4 520 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 ANKRD53Q8N9V6 530 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 SLC13A3Q8WWT9 602 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 MVB12AQ96EY5 273 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 C17orf62Q9BQA9 187 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 FAM117AQ9C073 453 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 NT5DC2Q9H857 520 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 NDOR1Q9UHB4 597 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 KCND3Q9UK17 655 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 GRID1Q9ULK0 1009 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 PCDHGA6Q9Y5G7 932 aa19.34■□□□□ 0.69
PTCD3-206ENST00000465560 NDUFS4O43181 175 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms