RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MRPS21P82921 87 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 DNAJC14Q6Y2X3 702 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 TRIML2Q8N7C3 387 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 GFM2Q969S9 779 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 MPP4Q96JB8 637 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 CD320Q9NPF0 282 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 SIRT5Q9NXA8 310 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 FZD4Q9ULV1 537 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 TSC22D4Q9Y3Q8 395 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 PIAS3Q9Y6X2 628 aa20.94■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3DA0A087WVF3 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3IA0A087WXS9 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3EA0A087X179 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3KA0A087X1G2 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3FA6NER0 549 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3LB9A6J9 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 KCNJ13O60928 360 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 BMP10O95393 424 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 ANXA6P08133 673 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3HP0C7X1 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 HOXB9P17482 250 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 SOX11P35716 441 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TRPC1P48995 793 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 PHEXP78562 749 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 GRSF1Q12849 480 aaKnown RBP eCLIP20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 COL19A1Q14993 1142 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 UGT8Q16880 541 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3GQ6DHY5 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 OR4F3Q6IEY1 312 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3CQ6IPX1 549 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 CHST15Q7LFX5 561 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D21Q8IYX1 336 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 TBC1D3Q8IZP1 549 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 DTWD1Q8N5C7 304 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 OR10A6Q8NH74 314 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 FAM110BQ8TC76 370 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 CPPED1Q9BRF8 314 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 OLAHQ9NV23 265 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 MTCH2Q9Y6C9 303 aa20.93■□□□□ 0.94
PDLIM2-216ENST00000464275 CCDC160A6NGH7 325 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 MYF6P23409 242 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 TIA1P31483 386 aaKnown RBP eCLIP20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 CLCNKAP51800 687 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 CYP2A13Q16696 494 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 GTDC1Q4AE62 458 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 ZNF548Q8NEK5 533 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 OR8J2Q8NGG1 315 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 ASB12Q8WXK4 309 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 INPP5KQ9BT40 448 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 IKZF5Q9H5V7 419 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 DMRT3Q9NQL9 472 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 FAM120CQ9NX05 1096 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 INVSQ9Y283 1065 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 NCKAP1Q9Y2A7 1128 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 SLC17A4Q9Y2C5 497 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 F5P12259 2224 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 HEATR5BQ9P2D3 2071 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 TRIM64CA6NLI5 447 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 GSTA4O15217 222 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 ANXA4P09525 319 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 ACP5P13686 325 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 COX7A2P14406 83 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 ATP6AP1Q15904 470 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 DUOXA1Q1HG43 343 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 USP30Q70CQ3 517 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 SPRED1Q7Z699 444 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 ANKRD46Q86W74 232 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 OR7A2PQ8NGA2 310 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 SIPA1Q96FS4 1042 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 APOOQ9BUR5 198 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 REXO4Q9GZR2 422 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 GORASP2Q9H8Y8 452 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 SLC6A13Q9NSD5 602 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 CD207Q9UJ71 328 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 AK5Q9Y6K8 562 aa20.92■□□□□ 0.94
PDLIM2-216ENST00000464275 RANBP2P49792 3224 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 ANKRD33BA6NCL7 494 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 FAM220BPB1ANY3 271 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 SOCS2O14508 198 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 RFXANKO14593 260 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 FUCA1P04066 466 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 CEACAM5P06731 702 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 PTPN6P29350 595 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 PIK3CBP42338 1070 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 CCT8P50990 548 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 SF1Q15637 639 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 GALNT18Q6P9A2 607 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 KRT78Q8N1N4 520 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 PCBD2Q9H0N5 130 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 KAT8Q9H7Z6 458 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 PELI2Q9HAT8 420 aa20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 CFAP20Q9Y6A4 193 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-216ENST00000464275 A0A087WXM4 84 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 ELOVL7A1L3X0 281 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 SCAMP2O15127 329 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 SH3BGRLO75368 114 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 RASAL1O95294 804 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CDH1P12830 882 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CKMT2P17540 419 aa20.9■□□□□ 0.94
PDLIM2-216ENST00000464275 CDH2P19022 906 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms