RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 MCOLN3Q8TDD5 553 aa12.54□□□□□ -0.4
MRPL55-224ENST00000464148 ZNF559Q9BR84 538 aa12.54□□□□□ -0.4
MRPL55-224ENST00000464148 P2RY12Q9H244 342 aa12.54□□□□□ -0.4
MRPL55-224ENST00000464148 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
MRPL55-224ENST00000464148 MARCH4Q9P2E8 410 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-224ENST00000464148 SCN2AQ99250 2005 aa12.54□□□□□ -0.4
MRPL55-224ENST00000464148 OR2W5A6NFC9 320 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 H0YIG0 161 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 P2RX6O15547 441 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 MAN1A2O60476 641 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 STATHP02808 62 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 CYC1P08574 325 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 HOXB4P17483 251 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-224ENST00000464148 GRIA1P42261 906 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 XCR1P46094 333 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 AGTR2P50052 363 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 EIF3BP55884 814 aaKnown RBP12.53□□□□□ -0.4
MRPL55-224ENST00000464148 TAS2R50P59544 299 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 PRDX1Q06830 199 aaKnown RBP12.53□□□□□ -0.4
MRPL55-224ENST00000464148 ACTN3Q08043 901 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-224ENST00000464148 PTK6Q13882 451 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 ZNF425Q6IV72 752 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 LRRC6Q86X45 466 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 PLD3Q8IV08 490 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 ARHGEF39Q8N4T4 335 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 OR51Q1Q8NH59 317 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 ALG3Q92685 438 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 NPAS2Q99743 824 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 TMUB1Q9BVT8 246 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 MMP25Q9NPA2 562 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 FAM114A2Q9NRY5 505 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 TRMT1Q9NXH9 659 aaKnown RBP12.53□□□□□ -0.4
MRPL55-224ENST00000464148 HCN3Q9P1Z3 774 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 TNFRSF10DQ9UBN6 386 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 TCAF1Q9Y4C2 921 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 ASB1Q9Y576 335 aa12.53□□□□□ -0.4
MRPL55-224ENST00000464148 NKX2-6A6NCS4 301 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 FAM90A27PA6NNH2 459 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 ZNF839A8K0R7 811 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 NDC80O14777 642 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 HAT1O14929 419 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 SLC25A12O75746 678 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 NEURL1O76050 574 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 MATN4O95460 622 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 TPOP07202 933 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 ERGP11308 486 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 DNAJA1P31689 397 aaKnown RBP12.52□□□□□ -0.41
MRPL55-224ENST00000464148 PTGER1P34995 402 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 PTGS2P35354 604 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 PNLIPRP1P54315 467 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 ARHGAP19Q14CB8 494 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.52□□□□□ -0.41
MRPL55-224ENST00000464148 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.41
MRPL55-224ENST00000464148 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 CHERPQ8IWX8 916 aaKnown RBP12.52□□□□□ -0.41
MRPL55-224ENST00000464148 MMP21Q8N119 569 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 CPSF7Q8N684 471 aaKnown RBP12.52□□□□□ -0.41
MRPL55-224ENST00000464148 PPFIBP2Q8ND30 876 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 ASB5Q8WWX0 329 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 PEX13Q92968 403 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 FAM136AQ96C01 138 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 LPAR4Q99677 370 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 EBNA1BP2Q99848 306 aaKnown RBP12.52□□□□□ -0.41
MRPL55-224ENST00000464148 DESI2Q9BSY9 194 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 CDCP1Q9H5V8 836 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 ETNK1Q9HBU6 452 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 KCNJ16Q9NPI9 418 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 CHRAC1Q9NRG0 131 aa12.52□□□□□ -0.41
MRPL55-224ENST00000464148 ARHGEF33A8MVX0 844 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 SMAPO00193 183 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 TFECO14948 347 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-224ENST00000464148 NME2P1O60361 137 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 IPO7O95373 1038 aaKnown RBP12.51□□□□□ -0.41
MRPL55-224ENST00000464148 NSA2O95478 260 aaKnown RBP12.51□□□□□ -0.41
MRPL55-224ENST00000464148 IGFBP2P18065 325 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 NME2P22392 152 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 RPS3P23396 243 aaKnown RBP eCLIP12.51□□□□□ -0.41
MRPL55-224ENST00000464148 CHRNB4P30926 498 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 FMO4P31512 558 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 HSD17B2P37059 387 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 IST1P53990 364 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 PPP2R2AP63151 447 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 ABATP80404 500 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 RELAQ04206 551 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 GTF3C1Q12789 2109 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 MYBPHQ13203 477 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 NSDHLQ15738 373 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 SFT2D3Q587I9 215 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 RNFT1Q5M7Z0 435 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 THEMIS2Q5TEJ8 643 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 MEI1Q5TIA1 1274 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 CES4AQ5XG92 561 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 TMEM211Q6ICI0 200 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 PRSS41Q7RTY9 318 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 CD163Q86VB7 1156 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 CHDHQ8NE62 594 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-224ENST00000464148 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 NRGNQ92686 78 aa12.51□□□□□ -0.41
MRPL55-224ENST00000464148 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms