RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 PLEKHN1Q494U1 663 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 SBSNQ6UWP8 590 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 ATCAYQ86WG3 371 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 C17orf64Q86WR6 236 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 MMGT1Q8N4V1 131 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 NKAPQ8N5F7 415 aaKnown RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 LRRN4CLQ8ND94 238 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 CPT1CQ8TCG5 803 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 PYROXD1Q8WU10 500 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 ATL1Q8WXF7 558 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 FBXL8Q96CD0 374 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 MMABQ96EY8 250 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 OR4K3Q96R72 315 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 ZBTB20Q9HC78 741 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 MKKSQ9NPJ1 570 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-210ENST00000462125 ARL15Q9NXU5 204 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 GRHL1Q9NZI5 618 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 TRPC4Q9UBN4 977 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 C3orf18Q9UK00 162 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 IKZF3Q9UKT9 509 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 SH2B3Q9UQQ2 575 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 NBASA2RRP1 2371 aa12.55□□□□□ -0.4
C9orf3-210ENST00000462125 COL12A1Q99715 3063 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 MDC1Q14676 2089 aaKnown RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 RAD51CO43502 376 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 NSA2O95478 260 aaKnown RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 HPP00738 406 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 ZNF37AP17032 561 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 TAS2R39P59534 338 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 SRSF1Q07955 248 aaKnown RBP eCLIP12.54□□□□□ -0.46e-7■■■□□ 18.9
C9orf3-210ENST00000462125 Q0VFX4 171 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 CALCOCO2Q13137 446 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 INPP5JQ15735 1006 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 PPP1R3AQ16821 1122 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 GLE1Q53GS7 698 aaKnown RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 TMEM214Q6NUQ4 689 aaKnown RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 Q6ZS92 163 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 CAMKVQ8NCB2 501 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 GALNT11Q8NCW6 608 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 TM9SF4Q92544 642 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 MFRPQ9BY79 579 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 LHPPQ9H008 270 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 RHOJQ9H4E5 214 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 SLAMF7Q9NQ25 335 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 C14orf105Q9NVL8 296 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 RAB21Q9UL25 225 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 B3GNT3Q9Y2A9 372 aa12.54□□□□□ -0.4
C9orf3-210ENST00000462125 MRPS2Q9Y399 296 aaKnown RBP12.54□□□□□ -0.4
C9orf3-210ENST00000462125 LOC102723996A0A087X1L8 192 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 FAM95CA0A1B0GW59 222 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 FEZF1A0PJY2 475 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 IDSB3KWA1 339 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 VPS4BO75351 444 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 WISP3O95389 354 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-210ENST00000462125 BMP10O95393 424 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 C1QAP02745 245 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 ANXA5P08758 320 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 CDH1P12830 882 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 ACPPP15309 386 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 ITGA3P26006 1051 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 SSTR1P30872 391 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 GRK3P35626 688 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 BCL6P41182 706 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 AVPR1BP47901 424 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 CDKL1Q00532 357 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 UBAP2LQ14157 1087 aaKnown RBP12.53□□□□□ -0.4
C9orf3-210ENST00000462125 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-210ENST00000462125 AGAP7PQ5VUJ5 663 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 WDR93Q6P2C0 686 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 TMEM205Q6UW68 189 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 NDUFAF7Q7L592 441 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 ASPGQ86U10 573 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 PARP9Q8IXQ6 854 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 PRSS58Q8IYP2 241 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 ZADH2Q8N4Q0 377 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 EFCAB3Q8N7B9 438 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 MFSD9Q8NBP5 474 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 OR9A4Q8NGU2 314 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 SLC13A3Q8WWT9 602 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 ALKBH8Q96BT7 664 aaKnown RBP12.53□□□□□ -0.4
C9orf3-210ENST00000462125 PYCR2Q96C36 320 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 AGAP4Q96P64 663 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 LMF1Q96S06 567 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 YIPF2Q9BWQ6 316 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 DPH5Q9H2P9 285 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 VPS4AQ9UN37 437 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 SLC22A7Q9Y694 548 aa12.53□□□□□ -0.4
C9orf3-210ENST00000462125 TRBC2A0A5B9 178 aa12.52□□□□□ -0.41
C9orf3-210ENST00000462125 PABPN1LA6NDY0 278 aaKnown RBP12.52□□□□□ -0.41
C9orf3-210ENST00000462125 CXorf49A8MYA2 514 aaPredicted RBP12.52□□□□□ -0.41
C9orf3-210ENST00000462125 CDC7O00311 574 aa12.52□□□□□ -0.41
C9orf3-210ENST00000462125 MAP2K7O14733 419 aa12.52□□□□□ -0.41
C9orf3-210ENST00000462125 FFAR3O14843 346 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms