RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 MMP11P24347 488 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 SERPINB9P50453 376 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 RGS1Q08116 209 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 FAM83EQ2M2I3 478 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 FAM69BQ5VUD6 431 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 NIPAL1Q6NVV3 410 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 KLC3Q6P597 504 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 MRGPREQ86SM8 312 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 SPATA6LQ8N4H0 392 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.05■■□□□ 1.12
CBX3-204ENST00000456948 NEIL2Q969S2 332 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 OR4K3Q96R72 315 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 SLC25A23Q9BV35 468 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 SARGQ9BW04 601 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 FUT8Q9BYC5 575 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 MKKSQ9NPJ1 570 aaPredicted RBP22.05■■□□□ 1.12
CBX3-204ENST00000456948 TRPC4Q9UBN4 977 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 CCDC88CQ9P219 2028 aa22.05■■□□□ 1.12
CBX3-204ENST00000456948 A0A087WUV0 522 aaPredicted RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 URADA6NGE7 173 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 NCF1BA6NI72 391 aaPredicted RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 SYCE1LA8MT33 242 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 NCF1CA8MVU1 366 aaPredicted RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 H0YIG0 161 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 NCF1P14598 390 aaPredicted RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 TYK2P29597 1187 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 PWP1Q13610 501 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 ATP1A4Q13733 1029 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 EFTUD2Q15029 972 aaKnown RBP eCLIP22.04■■□□□ 1.122e-11■■■■□ 23.8
CBX3-204ENST00000456948 LGSNQ5TDP6 509 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 NXPE4Q6UWF7 544 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 COX15Q7KZN9 410 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 CNPY4Q8N129 248 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 STT3BQ8TCJ2 826 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 TSNARE1Q96NA8 513 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 UNKQ9C0B0 810 aaKnown RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 ANKHQ9HCJ1 492 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 ZNF71Q9NQZ8 489 aaPredicted RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 C14orf105Q9NVL8 296 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 P4HTMQ9NXG6 502 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 GPRC5BQ9NZH0 403 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 NFU1Q9UMS0 254 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 SH2B3Q9UQQ2 575 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 MAP4K5Q9Y4K4 846 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 PCDHGB7Q9Y5F8 929 aa22.04■■□□□ 1.12
CBX3-204ENST00000456948 PCDHGA9Q9Y5G4 932 aaKnown RBP22.04■■□□□ 1.12
CBX3-204ENST00000456948 VSTM2BA6NLU5 285 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 PCDH17O14917 1159 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 KRT38O76015 456 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 ZGLP1P0C6A0 271 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 RHOXF2BP0C7M4 288 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 SLC35E2BP0CK96 405 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 CNTFP26441 200 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 AHRP35869 848 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 BCL6P41182 706 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 MSH2P43246 934 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 SERPINB8P50452 374 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 PGDP52209 483 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 RBBP7Q16576 425 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 ZXDCQ2QGD7 858 aaPredicted RBP22.03■■□□□ 1.12
CBX3-204ENST00000456948 CMC1Q7Z7K0 106 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 TMPRSS11BQ86T26 416 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 TRPV3Q8NET8 790 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 TM4SF19Q96DZ7 209 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 RHOXF2Q9BQY4 288 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 CRB3Q9BUF7 120 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 SOX17Q9H6I2 414 aaPredicted RBP22.03■■□□□ 1.12
CBX3-204ENST00000456948 ATP13A2Q9NQ11 1180 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 CTSFQ9UBX1 484 aa22.03■■□□□ 1.12
CBX3-204ENST00000456948 TLN1Q9Y490 2541 aaKnown RBP22.03■■□□□ 1.12
CBX3-204ENST00000456948 A0A0A6YYC8 382 aaPredicted RBP22.02■■□□□ 1.12
CBX3-204ENST00000456948 I3L1I5 382 aaPredicted RBP22.02■■□□□ 1.12
CBX3-204ENST00000456948 AGPSO00116 658 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 CLGNO14967 610 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 LCMT2O60294 686 aaKnown RBP22.02■■□□□ 1.12
CBX3-204ENST00000456948 STK16O75716 305 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 NSA2O95478 260 aaKnown RBP22.02■■□□□ 1.12
CBX3-204ENST00000456948 SERPIND1P05546 499 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 UMODP07911 640 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 TFEBP19484 476 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 GGT5P36269 586 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 CDC16Q13042 620 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 HERC3Q15034 1050 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 OR4D1Q15615 310 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 CATSPEREQ5SY80 951 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 IRAK1BP1Q5VVH5 260 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 ASB18Q6ZVZ8 466 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 TRMT10CQ7L0Y3 403 aaKnown RBP22.02■■□□□ 1.12
CBX3-204ENST00000456948 VN1R4Q7Z5H5 301 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 HPS6Q86YV9 775 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 KLHDC8AQ8IYD2 350 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 KRT78Q8N1N4 520 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 TTLQ8NG68 377 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 SPSB2Q99619 263 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 PITHD1Q9GZP4 211 aaPredicted RBP22.02■■□□□ 1.12
CBX3-204ENST00000456948 ALG9Q9H6U8 611 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 DNAJC11Q9NVH1 559 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 NUDT4Q9NZJ9 180 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 ZFP69BQ9UJL9 534 aa22.02■■□□□ 1.12
CBX3-204ENST00000456948 ANAPC2Q9UJX6 822 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms