RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 E7EQ34 232 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TPST1O60507 370 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 C6P13671 934 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PCSK2P16519 638 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 HOXB9P17482 250 aaPredicted RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 MAPK1P28482 360 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 IMPA1P29218 277 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PBLDP30039 288 aaPredicted RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 MAT2AP31153 395 aaKnown RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 SOX11P35716 441 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TXNL4AP83876 142 aaKnown RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 IRF8Q02556 426 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 DPTQ07507 201 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 CYP4F3Q08477 520 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 CSTF3Q12996 717 aaKnown RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 NAE1Q13564 534 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 ATP6AP1Q15904 470 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 RUNDC3AQ59EK9 446 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 KIAA0895LQ68EN5 471 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 GLYATQ6IB77 296 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 RIMKLAQ8IXN7 391 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TBC1D21Q8IYX1 336 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 FAM9CQ8IZT9 166 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 WDR20Q8TBZ3 569 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TESCQ96BS2 214 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 NSMCE2Q96MF7 247 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TRAPPC9Q96Q05 1148 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 FAM192AQ9GZU8 254 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PAIP1Q9H074 479 aaKnown RBP10.34□□□□□ -0.75
PKP4-206ENST00000452162 ZNF696Q9H7X3 374 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 SERHLQ9NQF3 203 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 PPT2Q9UMR5 302 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 FADS3Q9Y5Q0 445 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 CABIN1Q9Y6J0 2220 aa10.34□□□□□ -0.75
PKP4-206ENST00000452162 TP53BP1Q12888 1972 aaPredicted RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 CDH1P12830 882 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 PAX7P23759 505 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 MPLP40238 635 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 SPEM2Q0P670 501 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 DOC2AQ14183 400 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 XKR6Q5GH73 641 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 LRIF1Q5T3J3 769 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 GRHL2Q6ISB3 625 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 SPRED1Q7Z699 444 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 CARM1Q86X55 608 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 RNF175Q8N4F7 328 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 MFSD2AQ8NA29 543 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 FBXO15Q8NCQ5 510 aaPredicted RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 ZNF548Q8NEK5 533 aaPredicted RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 DNAJB8Q8NHS0 232 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 TSSK3Q96PN8 268 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 GBP5Q96PP8 586 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 ORAI3Q9BRQ5 295 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 PCED1AQ9H1Q7 454 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 OR2AG1Q9H205 316 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 PILRBQ9UKJ0 227 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 A0A096LPI6 279 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 PATE3B3GLJ2 98 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 H0YIV9 168 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 DLGAP1O14490 977 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 ACOX3O15254 700 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 MMP20O60882 483 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 RNGTTO60942 597 aaKnown RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 ERN1O75460 977 aaKnown RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 PCDH8O95206 1070 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 SLC16A8O95907 504 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 ANXA6P08133 673 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 PTPN6P29350 595 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 S100A3P33764 101 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 POLE2P56282 527 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 GTDC1Q4AE62 458 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 NHSL2Q5HYW2 709 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 RAET1GQ6H3X3 334 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 NOXRED1Q6NXP6 359 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 DNAJC14Q6Y2X3 702 aaPredicted RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 CBR4Q8N4T8 237 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 OR2T12Q8NG77 320 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 DNASE2BQ8WZ79 361 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 KLK6Q92876 244 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 APOLD1Q96LR9 279 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 FOPNLQ96NB1 174 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 CPPED1Q9BRF8 314 aaPredicted RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 C9orf16Q9BUW7 83 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 MIR1-1HGQ9H1L0 117 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 PARD6AQ9NPB6 346 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 SLC6A13Q9NSD5 602 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 CIDEBQ9UHD4 219 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 ZFR2Q9UPR6 939 aaKnown RBP10.33□□□□□ -0.76
PKP4-206ENST00000452162 AP3M1Q9Y2T2 418 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 PCDHGA5Q9Y5G8 931 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 CEP250Q9BV73 2442 aa10.33□□□□□ -0.76
PKP4-206ENST00000452162 A0A1W2PQU0 124 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 H3BM21 787 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TNFAIP8O95379 198 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 C1orf105O95561 183 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 FAM58BPP0C7Q3 252 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 TGM1P22735 817 aa10.32□□□□□ -0.76
PKP4-206ENST00000452162 HNF4AP41235 474 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms