RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 GLYATQ6IB77 296 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 ERMP1Q7Z2K6 904 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 COMMD6Q7Z4G1 85 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 TMEM132CQ8N3T6 1108 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 ZNF548Q8NEK5 533 aaPredicted RBP17.02■□□□□ 0.32
LMNA-208ENST00000448611 ABHD11Q8NFV4 315 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 OR2T12Q8NG77 320 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 OR10A6Q8NH74 314 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 STARD8Q92502 1023 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 BMFQ96LC9 184 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 OR2M4Q96R27 311 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 OR51B5Q9H339 312 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 KAT8Q9H7Z6 458 aaKnown RBP17.02■□□□□ 0.32
LMNA-208ENST00000448611 CARS2Q9HA77 564 aaKnown RBP17.02■□□□□ 0.32
LMNA-208ENST00000448611 PRM3Q9NNZ6 103 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 AURKCQ9UQB9 309 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 AP3M1Q9Y2T2 418 aa17.02■□□□□ 0.32
LMNA-208ENST00000448611 C10orf142B7Z368 130 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 H0Y8X5 98 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 RFXANKO14593 260 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 HNRNPA2B1P22626 353 aaKnown RBP17.02■□□□□ 0.31
LMNA-208ENST00000448611 GTF2A1P52655 376 aaPredicted RBP17.02■□□□□ 0.31
LMNA-208ENST00000448611 HKDC1Q2TB90 917 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 TBCELQ5QJ74 424 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 TPRG1LQ5T0D9 272 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 CAMKMTQ7Z624 323 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 ICA1LQ8NDH6 482 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 CDC26Q8NHZ8 85 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.02■□□□□ 0.313e-7■□□□□ 9.5
LMNA-208ENST00000448611 OR1E3Q8WZA6 343 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 NELL1Q92832 810 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 SH3KBP1Q96B97 665 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 GBP5Q96PP8 586 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 SEMA6AQ9H2E6 1030 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 PRDM8Q9NQV8 689 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 CUEDC1Q9NWM3 386 aaPredicted RBP17.02■□□□□ 0.31
LMNA-208ENST00000448611 FAM120CQ9NX05 1096 aaKnown RBP17.02■□□□□ 0.31
LMNA-208ENST00000448611 THEGQ9P2T0 379 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 EBF1Q9UH73 591 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 BTBD3Q9Y2F9 522 aa17.02■□□□□ 0.31
LMNA-208ENST00000448611 LRRC72A6NJI9 287 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 OR52A4PA6NMU1 304 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 PDZK1P1A8MUH7 402 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 SCAMP1O15126 338 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 HNRNPRO43390 633 aaKnown RBP17.01■□□□□ 0.31
LMNA-208ENST00000448611 GSNP06396 782 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 UMPSP11172 480 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 LAMP1P11279 417 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 IL10P22301 178 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 TRPC1P48995 793 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 GZMMP51124 257 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 RAB28P51157 221 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 PHEXP78562 749 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 DUOXA1Q1HG43 343 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 IRGCQ6NXR0 463 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 LPCAT2Q7L5N7 544 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 METTL4Q8N3J2 472 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 RAB42Q8N4Z0 105 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 OR4K1Q8NGD4 311 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 MIEF2Q96C03 454 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 BIRC7Q96CA5 298 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 PDXPQ96GD0 296 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 AURKBQ96GD4 344 aaPredicted RBP17.01■□□□□ 0.31
LMNA-208ENST00000448611 BTBD9Q96Q07 612 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 RHBGQ9H310 441 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 MVB12BQ9H7P6 319 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 SLC2A4RGQ9NR83 387 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 USP36Q9P275 1121 aaKnown RBP17.01■□□□□ 0.31
LMNA-208ENST00000448611 CNOT11Q9UKZ1 510 aaKnown RBP17.01■□□□□ 0.31
LMNA-208ENST00000448611 MAPRE3Q9UPY8 281 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 INVSQ9Y283 1065 aa17.01■□□□□ 0.31
LMNA-208ENST00000448611 GNG14A0A1W2PPG7 69 aa17■□□□□ 0.31
LMNA-208ENST00000448611 GABRR3A8MPY1 467 aa17■□□□□ 0.31
LMNA-208ENST00000448611 SAP18O00422 153 aaKnown RBP17■□□□□ 0.31
LMNA-208ENST00000448611 YY2O15391 372 aa17■□□□□ 0.31
LMNA-208ENST00000448611 KLHL18O94889 574 aa17■□□□□ 0.31
LMNA-208ENST00000448611 PIM1P11309 404 aaPredicted RBP17■□□□□ 0.31
LMNA-208ENST00000448611 SRFP11831 508 aa17■□□□□ 0.31
LMNA-208ENST00000448611 VCANP13611 3396 aa17■□□□□ 0.31
LMNA-208ENST00000448611 UQCRBP14927 111 aa17■□□□□ 0.31
LMNA-208ENST00000448611 PKLRP30613 574 aa17■□□□□ 0.31
LMNA-208ENST00000448611 ZNF763Q0D2J5 394 aa17■□□□□ 0.31
LMNA-208ENST00000448611 MTX3Q5HYI7 312 aa17■□□□□ 0.31
LMNA-208ENST00000448611 ANKRD26P1Q6NSI1 321 aa17■□□□□ 0.31
LMNA-208ENST00000448611 AMIGO2Q86SJ2 522 aa17■□□□□ 0.31
LMNA-208ENST00000448611 CALHM3Q86XJ0 350 aa17■□□□□ 0.31
LMNA-208ENST00000448611 PHACTR4Q8IZ21 702 aa17■□□□□ 0.31
LMNA-208ENST00000448611 PAPD5Q8NDF8 572 aaKnown RBP17■□□□□ 0.31
LMNA-208ENST00000448611 TRPV3Q8NET8 790 aa17■□□□□ 0.31
LMNA-208ENST00000448611 HMGB4Q8WW32 186 aa17■□□□□ 0.31
LMNA-208ENST00000448611 NSMCE2Q96MF7 247 aa17■□□□□ 0.31
LMNA-208ENST00000448611 AIF1LQ9BQI0 150 aa17■□□□□ 0.31
LMNA-208ENST00000448611 XKR8Q9H6D3 395 aa17■□□□□ 0.31
LMNA-208ENST00000448611 SCHIP1Q9P0W5 487 aaPredicted RBP17■□□□□ 0.31
LMNA-208ENST00000448611 NDRG2Q9UN36 371 aaKnown RBP17■□□□□ 0.31
LMNA-208ENST00000448611 EXO1Q9UQ84 846 aaKnown RBP17■□□□□ 0.31
LMNA-208ENST00000448611 ERVK-11Q9UQG0 969 aa17■□□□□ 0.31
LMNA-208ENST00000448611 APBB3O95704 486 aa17■□□□□ 0.31
LMNA-208ENST00000448611 TBX6O95947 436 aaPredicted RBP17■□□□□ 0.31
LMNA-208ENST00000448611 BMP2P12643 396 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms