RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CHN2P52757 468 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CLDN2P57739 230 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CYP4F2P78329 520 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 LAPTM5Q13571 262 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 AGERQ15109 404 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 FAM98BQ52LJ0 330 aaKnown RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 TMEM31Q5JXX7 168 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 LRIF1Q5T3J3 769 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 KIAA1161Q6NSJ0 714 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 TMIGD1Q6UXZ0 262 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 RD3Q7Z3Z2 195 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 COMMD6Q7Z4G1 85 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 C17orf64Q86WR6 236 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 HORMAD1Q86X24 394 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 TBC1D21Q8IYX1 336 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 OXR1Q8N573 874 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF548Q8NEK5 533 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 WDR48Q8TAF3 677 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 MSLNLQ96KJ4 702 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 INSM2Q96T92 566 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRPF18Q99633 342 aaKnown RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CPPED1Q9BRF8 314 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 HAUS8Q9BT25 410 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 APOOQ9BUR5 198 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 DUSP26Q9BV47 211 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 C1QTNF7Q9BXJ2 289 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 XKR8Q9H6D3 395 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 DMRT3Q9NQL9 472 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ACSL5Q9ULC5 683 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 NCKAP1Q9Y2A7 1128 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 MAN2B2Q9Y2E5 1009 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ATG2BQ96BY7 2078 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 TRBV5-3A0A0A0MS03 114 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 FEZF1A0PJY2 475 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 OR52A4PA6NMU1 304 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PDZK1P1A8MUH7 402 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 H7BY64 318 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CLIC1O00299 241 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CACNB4O00305 520 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 FOXE1O00358 373 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 SCAMP2O15127 329 aaKnown RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 LDLRP01130 860 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PIM1P11309 404 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CD72P21854 359 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 TIA1P31483 386 aaKnown RBP eCLIP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ASMTP46597 345 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 WNT3P56703 355 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PPP2CBP62714 309 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PPP2CAP67775 309 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PHEXP78562 749 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CHRNB3Q05901 458 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 MAP7Q14244 749 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 FXNQ16595 210 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CYP2A13Q16696 494 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 DPY19L1Q2PZI1 675 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 TMEM259Q4ZIN3 620 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 IRAK1BP1Q5VVH5 260 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 IYDQ6PHW0 289 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 LCTLQ6UWM7 567 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 UGT2A3Q6UWM9 527 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ENPP6Q6UWR7 440 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ARHGAP22Q7Z5H3 698 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 LAS2Q8IYD9 372 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 MICU2Q8IYU8 434 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CLEC4FQ8N1N0 589 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 KRT78Q8N1N4 520 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 FAM86B1Q8N7N1 296 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 SMRP1Q8NCR6 262 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 OR10Q1Q8NGQ4 319 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 RPLP0P6Q8NHW5 317 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 WDR34Q96EX3 536 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 C11orf24Q96F05 449 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ABHD8Q96I13 439 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF597Q96LX8 424 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 NECTIN4Q96NY8 510 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRAP1Q96NZ9 151 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 SORBS1Q9BX66 1292 aaKnown RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 EHD1Q9H4M9 534 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CUEDC1Q9NWM3 386 aaPredicted RBP9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 SPASTQ9UBP0 616 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 CA5BQ9Y2D0 317 aa9.16□□□□□ -0.94
COL6A4P1-201ENST00000446690 ANKDD1BA6NHY2 528 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 GPR89AB7ZAQ6 455 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 PRMT3O60678 531 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 EPN2O95208 641 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 GPR89BP0CG08 455 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 PCSK2P16519 638 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZNF23P17027 643 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 PTPN6P29350 595 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 HPCAL1P37235 193 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 CCT8P50990 548 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 MC1RQ01726 317 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 MTAPQ13126 283 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 E2F2Q14209 437 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 CLCA4Q14CN2 919 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 PPP4R4Q6NUP7 873 aa9.15□□□□□ -0.94
COL6A4P1-201ENST00000446690 ZCCHC8Q6NZY4 707 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms