RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 CCDC88CQ9P219 2028 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 TRPM7Q96QT4 1865 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 GCM2O75603 506 aaPredicted RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 CDH12P55289 794 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 MGAT3Q09327 533 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 DMC1Q14565 340 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 NFE2Q16621 373 aaPredicted RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 DUOXA1Q1HG43 343 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 ZFP69Q49AA0 526 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 CCDC190Q86UF4 302 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 SYT12Q8IV01 421 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 CARNMT1Q8N4J0 409 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 GTF3C2Q8WUA4 911 aaPredicted RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 FCGR1BQ92637 280 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 GTPBP3Q969Y2 492 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 TRNT1Q96Q11 434 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 MTERF1Q99551 399 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 EXOSC4Q9NPD3 245 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 FAM8A1Q9UBU6 413 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 SLC22A14Q9Y267 594 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 PCDHB1Q9Y5F3 818 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 LYVE1Q9Y5Y7 322 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 CFAP20Q9Y6A4 193 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 PCDH7O60245 1069 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 AOC2O75106 756 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 WDR47O94967 919 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 COX7A2P14406 83 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 RFX2P48378 723 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 LIMK1P53667 647 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 DEFA1P59665 94 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 DEFA3P59666 94 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 PPIGQ13427 754 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■■■■■ 30.1
HDAC11-214ENST00000446613 Q5BKY6 102 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 ASCC1Q8N9N2 400 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 CEP19Q96LK0 163 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 FYTTD1Q96QD9 318 aaKnown RBP15.84■□□□□ 0.13
HDAC11-214ENST00000446613 GABARAPL3Q9BY60 117 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 PRRG3Q9BZD7 231 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 TPT1P8Q9HAU6 139 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 PRM3Q9NNZ6 103 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 TAS2R9Q9NYW1 312 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 FZD4Q9ULV1 537 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 GPSM3Q9Y4H4 160 aa15.84■□□□□ 0.13
HDAC11-214ENST00000446613 NOTOA8MTQ0 251 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 TNFRSF11BO00300 401 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 GPX5O75715 221 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 VNN2O95498 520 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 GPX2P18283 190 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 DAB2P98082 770 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 MAP2K5Q13163 448 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 CHRNA6Q15825 494 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 CLPPQ16740 277 aaPredicted RBP15.83■□□□□ 0.13
HDAC11-214ENST00000446613 FAM110CQ1W6H9 321 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 NCEH1Q6PIU2 408 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 ZNF605Q86T29 641 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 GPR151Q8TDV0 419 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 TESCQ96BS2 214 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 ZFYVE19Q96K21 471 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 COPS8Q99627 209 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 CNPPD1Q9BV87 410 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 TIGARQ9NQ88 270 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 NDUFAF4Q9P032 175 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 AP3M1Q9Y2T2 418 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 PEX16Q9Y5Y5 336 aa15.83■□□□□ 0.13
HDAC11-214ENST00000446613 VWA8A3KMH1 1905 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
HDAC11-214ENST00000446613 PRAMEF25A6NGN4 478 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 FAM227AF5H4B4 570 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 WWP2O00308 870 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 AMD1P17707 334 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 SOX3P41225 446 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 CDH4P55283 916 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 HSPA14Q0VDF9 509 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
HDAC11-214ENST00000446613 GAB1Q13480 694 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 PTCHD3Q3KNS1 767 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 TBRG1Q3YBR2 411 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 SERINC5Q86VE9 423 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 GALNT12Q8IXK2 581 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 NAGSQ8N159 534 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 OR10G2Q8NGC3 310 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 FUBP3Q96I24 572 aaKnown RBP eCLIP15.83■□□□□ 0.12
HDAC11-214ENST00000446613 DEPDC7Q96QD5 511 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 SLC30A2Q9BRI3 323 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 BARHL1Q9BZE3 327 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 GPR62Q9BZJ7 368 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 OR2B2Q9GZK3 357 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 RERGLQ9H628 205 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 CCDC59Q9P031 241 aaKnown RBP15.83■□□□□ 0.12
HDAC11-214ENST00000446613 RHCGQ9UBD6 479 aa15.83■□□□□ 0.12
HDAC11-214ENST00000446613 SMIM30A4D0T7 59 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 E9PQ18 207 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 ARHGAP33O14559 1287 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 SUV39H1O43463 412 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 CHRM5P08912 532 aaPredicted RBP15.82■□□□□ 0.12
HDAC11-214ENST00000446613 HLA-EP13747 358 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 RING1Q06587 406 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 SSX1Q16384 188 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 CCDC58Q4VC31 144 aa15.82■□□□□ 0.12
HDAC11-214ENST00000446613 ZNF852Q6ZMS4 543 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms