RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CHCHD6Q9BRQ6 235 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 CENPOQ9BU64 300 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 SP110Q9HB58 689 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 TRIM39Q9HCM9 518 aa8.3□□□□□ -1.08
HPS4-206ENST00000439453 TRBV5-3A0A0A0MS03 114 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 KRT87PA6NCN2 255 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 HMX3A6NHT5 357 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 IL6P05231 212 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 POU2F2P09086 479 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 HAPLN1P10915 354 aaPredicted RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 SLC19A1P41440 591 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 PIK3CBP42338 1070 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 C19orf57Q0VDD7 668 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 YIF1BQ5BJH7 314 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 KIAA1841Q6NSI8 718 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 FAM171BQ6P995 826 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 HORMAD1Q86X24 394 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 KRTCAP2Q8N6L1 136 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 ATG16L2Q8NAA4 619 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 KREMEN2Q8NCW0 462 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 OR4F6Q8NGB9 312 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 ZNF461Q8TAF7 563 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 TADA1Q96BN2 335 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CEP19Q96LK0 163 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 OR52E6Q96RD3 313 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CPPED1Q9BRF8 314 aaPredicted RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 APOL5Q9BWW9 433 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 GIMAP4Q9NUV9 329 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 DZANK1Q9NVP4 752 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 PSORS1C1Q9UIG5 152 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 HS3ST4Q9Y661 456 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 MYO10Q9HD67 2058 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 C19orf67A6NJJ6 358 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 NDUFS3O75489 264 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 GJB3O75712 270 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 TSPAN12O95859 305 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CYP2A7P20853 494 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 SOX6P35712 828 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 LHX1P48742 406 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 NPRL3Q12980 569 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 GPR17Q13304 367 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 GALNT3Q14435 633 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 DUSP7Q16829 419 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 C18orf21Q32NC0 220 aaPredicted RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 Q5BKY6 102 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 ERAP2Q6P179 960 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 PGBD5Q8N414 524 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 ZNF675Q8TD23 568 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 MYDGFQ969H8 173 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CDKN2AIPNLQ96HQ2 116 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 SLC30A2Q9BRI3 323 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 SFXN1Q9H9B4 322 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 IL1RAPQ9NPH3 570 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 RPRD1BQ9NQG5 326 aaKnown RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 hCG_2039718K7EN88 272 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 ARHGAP33O14559 1287 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 OR7A17O14581 309 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CTDSP2O14595 271 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CA5AP35218 305 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 PTPRNQ16849 979 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 PTCRAQ6ISU1 281 aaPredicted RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 GOLGA7Q7Z5G4 137 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 NOXA1Q86UR1 476 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 TCEAL8Q8IYN2 117 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 CADM2Q8N3J6 435 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 LIX1Q8N485 282 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 SIDT2Q8NBJ9 832 aaKnown RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 GLB1L3Q8NCI6 653 aaPredicted RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 SETD6Q8TBK2 473 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 BRSK1Q8TDC3 778 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 EEF1AKMT1Q8WVE0 214 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 LINGO1Q96FE5 620 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 EGLN2Q96KS0 407 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 NECAB3Q96P71 396 aaPredicted RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 KCNS3Q9BQ31 491 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 SAMD4AQ9UPU9 718 aaKnown RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 TRAPPC4Q9Y296 219 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 SAMHD1Q9Y3Z3 626 aaKnown RBP8.29□□□□□ -1.08
HPS4-206ENST00000439453 CCL27Q9Y4X3 112 aa8.29□□□□□ -1.08
HPS4-206ENST00000439453 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 OR6C75A6NL08 312 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 WASH4PA8MWX3 477 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 H7C4K7 107 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 UGT2B17O75795 530 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 FGF1P05230 155 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 CDK1P06493 297 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 YES1P07947 543 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ITGA2P17301 1181 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 ATF6P18850 670 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 RRM2P31350 389 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 HNF4AP41235 474 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 RFX2P48378 723 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 LIMK1P53667 647 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 FBXO43Q4G163 708 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 MSANTD2Q6P1R3 559 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 LYPD8Q6UX82 237 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 PSMG2Q969U7 264 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 MYLPFQ96A32 169 aa8.28□□□□□ -1.08
HPS4-206ENST00000439453 CLMPQ9H6B4 373 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms