RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 EFNA1P20827 205 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 EPHA2P29317 976 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 IRS1P35568 1242 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 C21orf58P58505 322 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 LSM3P62310 102 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 FADDQ13158 208 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 CAMK1Q14012 370 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 PERM1Q5SV97 790 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 CCDC149Q6ZUS6 474 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 ADCK1Q86TW2 530 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 METTL3Q86U44 580 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 SYT12Q8IV01 421 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 VRK3Q8IV63 474 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 OR2AP1Q8NGE2 309 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 IPCEF1Q8WWN9 437 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 SCRN2Q96FV2 425 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 MYOCQ99972 504 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 ABCG8Q9H221 673 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 ABCB8Q9NUT2 735 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 ATAD3AQ9NVI7 634 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 SIRT5Q9NXA8 310 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 THUMPD1Q9NXG2 353 aaKnown RBP15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 KIF17Q9P2E2 1029 aa15.86■□□□□ 0.13
CLCNKA-203ENST00000439316 OR2A25A4D2G3 310 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 TMEM247A6NEH6 219 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 C5orf67F2Z3F1 127 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 GFYI3L273 518 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 WBP4O75554 376 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 OLFM2O95897 454 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 LHCGRP22888 699 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 ITPKAP23677 461 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 GABRR2P28476 465 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 TGFBR2P37173 567 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 NCS1P62166 190 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 HSPA14Q0VDF9 509 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 LMAN2Q12907 356 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 CSTF3Q12996 717 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 DGCR6Q14129 220 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 SHHQ15465 462 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 INAQ16352 499 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 HIST2H2ACQ16777 129 aaPredicted RBP15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 PROX2Q3B8N5 592 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 IQCCQ4KMZ1 466 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 TXNDC8Q6A555 127 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 RFLNAQ6ZTI6 216 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 HS6ST3Q8IZP7 471 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 SYNPOQ8N3V7 929 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 RNF175Q8N4F7 328 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 ARL14EPQ8N8R7 260 aaPredicted RBP15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 OR8J2Q8NGG1 315 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 ECHDC3Q96DC8 303 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 PSD2Q9BQI7 771 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 ASPSCR1Q9BZE9 553 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 REEP1Q9H902 201 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 MBD1Q9UIS9 605 aaPredicted RBP15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 ERVK-11Q9UQG0 969 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 SLC22A14Q9Y267 594 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 PPIL1Q9Y3C6 166 aa15.85■□□□□ 0.13
CLCNKA-203ENST00000439316 C9P02748 559 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 ALOX5P09917 674 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 TGM1P22735 817 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 AP1S2P56377 157 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 PTSQ03393 145 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 UBE3AQ05086 875 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 ZNF33BQ06732 778 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CHIT1Q13231 466 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 VEZF1Q14119 521 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 TMEM236Q5W0B7 351 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 ZNF621Q6ZSS3 439 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 NEK10Q6ZWH5 1172 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 USP45Q70EL2 814 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 GAREM2Q75VX8 874 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 ATG16L2Q8NAA4 619 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 SKA2Q8WVK7 121 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 APH1BQ8WW43 257 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 ASIC4Q96FT7 647 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 MCCC1Q96RQ3 725 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 P2RY13Q9BPV8 354 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 DPH2Q9BQC3 489 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 SPATA9Q9BWV2 254 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 TMPRSS11EQ9UL52 423 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CLEC4EQ9ULY5 219 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 PABPN1LA6NDY0 278 aaKnown RBP15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CLDN24A6NM45 220 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 TTC34A8MYJ7 566 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CCL16O15467 120 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 COX7A2P14406 83 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CYP2A7P20853 494 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 HALP42357 657 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 MAGEA10P43363 369 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CYP4F8P98187 520 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 NPRL3Q12980 569 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 PLEKHG6Q3KR16 790 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 PAGE2BQ5JRK9 111 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 PLEKHS1Q5SXH7 462 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 UBE2UQ5VVX9 321 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 CLECL1Q8IZS7 167 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 EPYCQ99645 322 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 GABARAPL3Q9BY60 117 aa15.84■□□□□ 0.13
CLCNKA-203ENST00000439316 SLIRPQ9GZT3 109 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms