RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KCNQ1P51787 676 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 POU6F2P78424 691 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-204ENST00000438964 ACVR1Q04771 509 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 ATG9BQ674R7 924 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 MED30Q96HR3 178 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 MAGIXQ9H6Y5 334 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CSNK1G1Q9HCP0 422 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 TNFRSF11BO00300 401 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 MANBAO00462 879 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 AP2A2O94973 939 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 MAGEA2P43356 314 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CRYBA2P53672 197 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 RPS24P62847 133 aaKnown RBP12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SPIBQ01892 262 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 HYAL2Q12891 473 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SERINC3Q13530 473 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 EIF4EBP2Q13542 120 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CDH18Q13634 790 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 VMACQ2NL98 169 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 PYDC2Q56P42 97 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 TJAP1Q5JTD0 557 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 C10orf120Q5SQS8 335 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 LIPKQ5VXJ0 399 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 GALNT7Q86SF2 657 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CCDC28AQ8IWP9 274 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 GPR65Q8IYL9 337 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SLC34A3Q8N130 599 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 HRASLS5Q96KN8 279 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 VPS35Q96QK1 796 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 POPDC3Q9HBV1 291 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 DNAJC27Q9NZQ0 273 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 TMPRSS11EQ9UL52 423 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CIB4A0PJX0 185 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 C2orf81A6NN90 581 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 PLD2O14939 933 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 ZNF780AO75290 641 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CYP2A6P11509 494 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SDC1P18827 310 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 KIR2DL3P43628 341 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 ADNP2Q6IQ32 1131 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 ZSWIM9Q86XI8 627 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 PTOV1Q86YD1 416 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SYT14Q8NB59 555 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 SH3KBP1Q96B97 665 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 DIRAS2Q96HU8 199 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 NXF2Q9GZY0 626 aaKnown RBP12.94□□□□□ -0.34
ACTN1-204ENST00000438964 CDCP1Q9H5V8 836 aa12.94□□□□□ -0.34
ACTN1-204ENST00000438964 AOC2O75106 756 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 PRLP01236 227 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 C9P02748 559 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 CYP17A1P05093 508 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 RHOQP17081 205 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ITPKAP23677 461 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 IL12RB1P42701 662 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 EXOC3L2Q2M3D2 409 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 C16orf59Q7L2K0 433 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ZZZ3Q8IYH5 903 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 CELF5Q8N6W0 485 aaKnown RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ATAD1Q8NBU5 361 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 SIMC1Q8NDZ2 872 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ST13P5Q8NFI4 369 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 OR10G2Q8NGC3 310 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 PRDM5Q9NQX1 630 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ACOXLQ9NUZ1 547 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 STMN3Q9NZ72 180 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 HMX3A6NHT5 357 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 B4DXG7 233 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 PCDH17O14917 1159 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 CDRT1O95170 752 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 GBAP04062 536 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 SRCP12931 536 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 GKP32189 559 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ABHD18Q0P651 414 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 MPPE1Q53F39 396 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 EIF3MQ7L2H7 374 aaKnown RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 APOBEC3FQ8IUX4 373 aaKnown RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 ADGRG2Q8IZP9 1017 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 TMCO6Q96DC7 493 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 PPP1R2P1Q96PQ5 205 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 MTERF1Q99551 399 aaKnown RBP12.93□□□□□ -0.34
ACTN1-204ENST00000438964 C1QTNF3Q9BXJ4 246 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 DYRK4Q9NR20 520 aa12.93□□□□□ -0.34
ACTN1-204ENST00000438964 UBL4AP11441 157 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 GGT2P36268 569 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 PBX3P40426 434 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 PPIGQ13427 754 aaKnown RBP eCLIP12.92□□□□□ -0.349e-12■□□□□ 11
ACTN1-204ENST00000438964 DSC3Q14574 896 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 LGI4Q8N135 537 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 COL21A1Q96P44 957 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 CINPQ9BW66 212 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 KCNH6Q9H252 994 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 CCDC59Q9P031 241 aaKnown RBP12.92□□□□□ -0.34
ACTN1-204ENST00000438964 PIM2Q9P1W9 311 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 NLKQ9UBE8 527 aa12.92□□□□□ -0.34
ACTN1-204ENST00000438964 SLC23A1Q9UHI7 598 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms