RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 CERCAMQ5T4B2 595 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRAMEF5Q5TYX0 476 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 DCAF12L2Q5VW00 463 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRAMEF6Q5VXH4 476 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 METRNLQ641Q3 311 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPECC1LQ69YQ0 1117 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GRHL2Q6ISB3 625 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PPP1R2P3Q6NXS1 205 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TTC27Q6P3X3 843 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 CYB5D1Q6P9G0 228 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FOXR2Q6PJQ5 311 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 B3GLCTQ6Y288 498 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TPGS1Q6ZTW0 290 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 DET1Q7L5Y6 550 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 RNF144BQ7Z419 303 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GPR180Q86V85 440 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 VPS36Q86VN1 386 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM131BQ86XD5 332 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TDRPQ86YL5 185 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 UBQLNLQ8IYU4 475 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 LSMEM2Q8N112 164 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GHDCQ8N2G8 530 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ANKRD13CQ8N6S4 541 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FNDC5Q8NAU1 212 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 MCPH1Q8NEM0 835 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 OR4K14Q8NGD5 310 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 BBS10Q8TAM1 723 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SLC35B2Q8TB61 432 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 NDNFQ8TB73 568 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ZNF596Q8TC21 504 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FCGR1BQ92637 280 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TNFRSF14Q92956 283 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 MCUR1Q96AQ8 359 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PTCD3Q96EY7 689 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 OTUB1Q96FW1 271 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 CDKN2AIPNLQ96HQ2 116 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PRRC1Q96M27 445 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SPATA33Q96N06 139 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TAAR6Q96RI8 345 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SIGLEC11Q96RL6 698 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 OLFM1Q99784 485 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 TSG101Q99816 390 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM110AQ9BQ89 295 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 RTP3Q9BQQ7 232 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 HAUS8Q9BT25 410 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 C9orf16Q9BUW7 83 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 KRTAP1-5Q9BYS1 174 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 SHCBP1LQ9BZQ2 653 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FN3KQ9H479 309 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 GSTO2Q9H4Y5 243 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 WDR76Q9H967 626 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 CALHM2Q9HA72 323 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 MRM3Q9HC36 420 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 HHATLQ9HCP6 504 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 APMAPQ9HDC9 416 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 EQTNQ9NQ60 294 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 FAM207AQ9NSI2 230 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 PIGVQ9NUD9 493 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 EURLQ9NYK6 297 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 RDH8Q9NYR8 311 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 VSX1Q9NZR4 365 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 LARSQ9P2J5 1176 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ERVK-18Q9QC07 812 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 STAP1Q9ULZ2 295 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 DDX19BQ9UMR2 479 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 IFT52Q9Y366 437 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 BZW2Q9Y6E2 419 aaKnown RBP3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ARHGEF40Q8TER5 1519 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ADCY9O60503 1353 aa3.47□□□□□ -1.85
HMGB1P12-201ENST00000438594 ABCC4O15439 1325 aa3.46□□□□□ -1.85
HMGB1P12-201ENST00000438594 PNPLA7Q6ZV29 1317 aa3.46□□□□□ -1.85
HMGB1P12-201ENST00000438594 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MBLAC1A4D2B0 266 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FAM90A10PA6NDY2 464 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MANSC4A6NHS7 340 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 CXorf49A8MYA2 514 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ANKRD66B4E2M5 251 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 WASH3PC4AMC7 463 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 H3BQ06 376 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FOXE1O00358 373 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ABCD4O14678 606 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 LSM1O15116 133 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MDM4O15151 490 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 INPPL1O15357 1258 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TRAPPC3O43617 180 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TLX3O43711 291 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FCMRO60667 390 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 NDUFS6O75380 124 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 ERLIN2O94905 339 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 BAG4O95429 457 aaKnown RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 SNAI1O95863 264 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 BMP15O95972 392 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TFP02787 698 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MT-ND1P03886 318 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 RETP07949 1114 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 KRT19P08727 400 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 MMP10P09238 476 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 TMEM191BP0C7N4 346 aa3.46□□□□□ -1.86
HMGB1P12-201ENST00000438594 FCGR2AP12318 317 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms