RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 ERVK-18Q9QC07 812 aa10.07□□□□□ -0.8
CLSTN1-203ENST00000435891 DNAH14Q0VDD8 3507 aa10.07□□□□□ -0.8
CLSTN1-203ENST00000435891 C8GP07360 202 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 PRPH2P23942 346 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 ALDH4A1P30038 563 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 PREPP48147 710 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 TUBA1BP68363 451 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SLC7A9P82251 487 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 MTAPQ13126 283 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 CTF1Q16619 201 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 MPP7Q5T2T1 576 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SHQ1Q6PI26 577 aaKnown RBP10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 TUBA1AQ71U36 451 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 B3GNT8Q7Z7M8 397 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SDR16C5Q8N3Y7 309 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 TERB1Q8NA31 727 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 PIK3C3Q8NEB9 887 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 FAR1Q8WVX9 515 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 MAL2Q969L2 176 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SAMD11Q96NU1 681 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 IL1RAPQ9NPH3 570 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 DENND4CQ5VZ89 1909 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 ARHGEF33A8MVX0 844 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 FADS2P1A8MWK0 482 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 CCNDBP1O95273 360 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 EIF2S1P05198 315 aaKnown RBP10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 AQP1P29972 269 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 HOXA9P31269 272 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 IRF8Q02556 426 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 TLE2Q04725 743 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 EPS8Q12929 822 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 TUBA3CQ13748 450 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 VMACQ2NL98 169 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 OR2T5Q6IEZ7 315 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 CCDC71Q8IV32 467 aaPredicted RBP10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 CCDC103Q8IW40 242 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 FAM20CQ8IXL6 584 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 OR2T29Q8NH02 315 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SH3KBP1Q96B97 665 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 OR4K3Q96R72 315 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 IFT52Q9Y366 437 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 NEDD8-MDP1E9PL57 170 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 CRYZL1O95825 349 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 ANGPTL1O95841 491 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 JUPP14923 745 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 CTSCP53634 463 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 LSM3P62310 102 aaKnown RBP10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 XKR6Q5GH73 641 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 TMEM215Q68D42 235 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 HIPK1Q86Z02 1210 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 OR2A12Q8NGT7 310 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 MCOLN3Q8TDD5 553 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 EFHD2Q96C19 240 aaPredicted RBP10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF689Q96CS4 500 aaPredicted RBP10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 NRBF2Q96F24 287 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 ALOXE3Q9BYJ1 711 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 NAALAD2Q9Y3Q0 740 aa10.06□□□□□ -0.8
CLSTN1-203ENST00000435891 SNPHO15079 494 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ARHGEF15O94989 841 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 COX7A2P14406 83 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 KDELR2P33947 212 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 GABARAPL2P60520 117 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 DOC2AQ14183 400 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 DUOXA1Q1HG43 343 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CCDC58Q4VC31 144 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CDKL4Q5MAI5 379 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 PDE12Q6L8Q7 609 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SERPINA11Q86U17 422 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ABHD11Q8NFV4 315 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 WDR20Q8TBZ3 569 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 FBLIM1Q8WUP2 373 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 NELL1Q92832 810 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 TCEAL4Q96EI5 215 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 HSH2DQ96JZ2 352 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 LINC00597Q9H2U6 94 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 TRIT1Q9H3H1 467 aaKnown RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 RAD21L1Q9H4I0 556 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 HMG20AQ9NP66 347 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ABCB10Q9NRK6 738 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CLDN25C9JDP6 229 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ICMTO60725 284 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SULT1C4O75897 302 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 CLPXO76031 633 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 IL1RNP18510 177 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 RYKP34925 604 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 IDUAP35475 653 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 OPRL1P41146 370 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 MASP1P48740 699 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SEPHS1P49903 392 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 HNMTP50135 292 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 PTPN5P54829 565 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 NAE1Q13564 534 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 TRIM60Q495X7 471 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 KDM4DQ6B0I6 523 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 Q6ZPB1 254 aaPredicted RBP10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 GPR155Q7Z3F1 870 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 ZNF366Q8N895 744 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
CLSTN1-203ENST00000435891 TRUB1Q8WWH5 349 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms