RNA–Protein interactions for RNA: ENST00000427099.1

TRO-209, Transcript of trophinin, humanhuman

TSL 3

Gene TRO, Length 562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-209ENST00000427099 CAMKVQ8NCB2 501 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 ST6GALNAC3Q8NDV1 305 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 METTL21AQ8WXB1 218 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 PSMF1Q92530 271 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 THAP11Q96EK4 314 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 CERS2Q96G23 380 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 MAGEB10Q96LZ2 347 aaPredicted RBP13.36□□□□□ -0.27
TRO-209ENST00000427099 C5orf34Q96MH7 638 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 BARD1Q99728 777 aaKnown RBP13.36□□□□□ -0.27
TRO-209ENST00000427099 KCNF1Q9H3M0 494 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 HCN3Q9P1Z3 774 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 CHMP2BQ9UQN3 213 aa13.36□□□□□ -0.27
TRO-209ENST00000427099 KCNE1BA0A087WTH5 132 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 IGHV3-20A0A0C4DH32 117 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 H0YIG0 161 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 SGK494L7N484 410 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 PCDH17O14917 1159 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 NSA2O95478 260 aaKnown RBP13.35□□□□□ -0.27
TRO-209ENST00000427099 C8orf89P0DMQ9 161 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 ITGAMP11215 1152 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 CDH1P12830 882 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 IL1RNP18510 177 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 FDXRP22570 491 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 CCND1P24385 295 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 GRK3P35626 688 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 BCL6P41182 706 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 ELK3P41970 407 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 PGGT1BP53609 377 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 IL2P60568 153 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 SP140Q13342 867 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 PCOLCEQ15113 449 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 PHKG1Q16816 387 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 MINDY4Q4G0A6 757 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 HECTD2Q5U5R9 776 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 B3GNTL1Q67FW5 361 aaPredicted RBP13.35□□□□□ -0.27
TRO-209ENST00000427099 CAPN13Q6MZZ7 669 aaPredicted RBP13.35□□□□□ -0.27
TRO-209ENST00000427099 TMEM205Q6UW68 189 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 FAM180AQ6UWF9 173 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 LCTLQ6UWM7 567 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 KIAA0408Q6ZU52 694 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 ASPGQ86U10 573 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 SLC26A11Q86WA9 606 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 CNTN4Q8IWV2 1026 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 PDIK1LQ8N165 341 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 OR51Q1Q8NH59 317 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 FAR1Q8WVX9 515 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 SLC13A3Q8WWT9 602 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 TRIM54Q9BYV2 358 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRO-209ENST00000427099 ZNF700Q9H0M5 742 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 ANKHQ9HCJ1 492 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 ARL15Q9NXU5 204 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 OSGIN2Q9Y236 505 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 VWA7Q9Y334 891 aa13.35□□□□□ -0.27
TRO-209ENST00000427099 LOC102723996A0A087X1L8 192 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 OR2W5A6NFC9 320 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 SEC24DO94855 1032 aaPredicted RBP13.34□□□□□ -0.27
TRO-209ENST00000427099 GUCA1CO95843 209 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 LDLRP01130 860 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 ICAM2P13598 275 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 NPPBP16860 134 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 IVDP26440 423 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 SOX11P35716 441 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 EFNA3P52797 238 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 MEF2AQ02078 507 aaPredicted RBP13.34□□□□□ -0.27
TRO-209ENST00000427099 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
TRO-209ENST00000427099 TRMT10BQ6PF06 316 aaKnown RBP13.34□□□□□ -0.27
TRO-209ENST00000427099 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 SHISA5Q8N114 240 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 KCT2Q8NC54 265 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 SLCO2A1Q92959 643 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 TM4SF19Q96DZ7 209 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 CYTH2Q99418 400 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 HAUS8Q9BT25 410 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 TUBB6Q9BUF5 446 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 VN1R1Q9GZP7 353 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 SCN3AQ9NY46 2000 aa13.34□□□□□ -0.27
TRO-209ENST00000427099 A0A1W2PQ72 361 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 USP27XA6NNY8 438 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 A8MUI8 341 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 OR1F1O43749 312 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 SERPIND1P05546 499 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 EDN3P14138 238 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 SAT1P21673 171 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 COL8A1P27658 744 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 XCR1P46094 333 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 ITGA8P53708 1063 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 GNG11P61952 73 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 AP2B1P63010 937 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 DR1Q01658 176 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 DUPD1Q68J44 220 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 FAM45BPQ6NSW5 357 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 RPUSD3Q6P087 351 aaKnown RBP13.33□□□□□ -0.28
TRO-209ENST00000427099 LANCL3Q6ZV70 420 aa13.33□□□□□ -0.28
TRO-209ENST00000427099 SYDE1Q6ZW31 735 aaPredicted RBP13.33□□□□□ -0.28
TRO-209ENST00000427099 CPEB2Q7Z5Q1 589 aaKnown RBP13.33□□□□□ -0.28
TRO-209ENST00000427099 ANKMY2Q8IV38 441 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms