RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 MACROD1Q9BQ69 325 aa17.17■□□□□ 0.34
HERC3-205ENST00000426683 SPNS1Q9H2V7 528 aa17.17■□□□□ 0.34
HERC3-205ENST00000426683 EPB41L4BQ9H329 900 aa17.17■□□□□ 0.34
HERC3-205ENST00000426683 CNOT10Q9H9A5 744 aaKnown RBP17.17■□□□□ 0.34
HERC3-205ENST00000426683 ZNF304Q9HCX3 659 aa17.17■□□□□ 0.34
HERC3-205ENST00000426683 PTBP2Q9UKA9 531 aaKnown RBP17.17■□□□□ 0.34
HERC3-205ENST00000426683 MAN2B2Q9Y2E5 1009 aa17.17■□□□□ 0.34
HERC3-205ENST00000426683 LOC400499M0QZD8 3231 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 TRBC2A0A5B9 178 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 TRIM49D1C9J1S8 452 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 UBXN8O00124 270 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 OR1F1O43749 312 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 STK16O75716 305 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 IPO13O94829 963 aaKnown RBP17.16■□□□□ 0.34
HERC3-205ENST00000426683 SLU7O95391 586 aaKnown RBP17.16■□□□□ 0.34
HERC3-205ENST00000426683 ALBP02768 609 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 FAM87AP0C7U9 286 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 GCAP28676 217 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 FOLR3P41439 243 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 REEP5Q00765 189 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 CDC16Q13042 620 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 ACAP2Q15057 778 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 NDUFA9Q16795 377 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 KLC3Q6P597 504 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 EXD3Q8N9H8 876 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 ZNF740Q8NDX6 193 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 OR2Y1Q8NGV0 311 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 RHEBL1Q8TAI7 183 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 ADAMTS17Q8TE56 1095 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 APOBEC4Q8WW27 367 aaKnown RBP17.16■□□□□ 0.34
HERC3-205ENST00000426683 SLC13A3Q8WWT9 602 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 THAP4Q8WY91 577 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 TM4SF19Q96DZ7 209 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 MVB12AQ96EY5 273 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 AIF1LQ9BQI0 150 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 SARGQ9BW04 601 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 DNAJC11Q9NVH1 559 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 CDC14AQ9UNH5 594 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 MRPS2Q9Y399 296 aaKnown RBP17.16■□□□□ 0.34
HERC3-205ENST00000426683 KCNMB2Q9Y691 235 aa17.16■□□□□ 0.34
HERC3-205ENST00000426683 MGAQ8IWI9 3026 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 A0A0A6YYC8 382 aaPredicted RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 EIF4E1BA6NMX2 242 aaKnown RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 SYCE1LA8MT33 242 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 I3L1I5 382 aaPredicted RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 TK2O00142 265 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 FOXS1O43638 330 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 SNRPAP09012 282 aaKnown RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 GNAZP19086 355 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 FBLP22087 321 aaKnown RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 VARSP26640 1264 aaKnown RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 OTX2P32243 289 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 SCTRP47872 440 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 POLE2P56282 527 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 NKG7Q16617 165 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 LGSNQ5TDP6 509 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 ADGRD1Q6QNK2 874 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 TMEM151BQ8IW70 566 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 PLD6Q8N2A8 252 aaKnown RBP17.15■□□□□ 0.34
HERC3-205ENST00000426683 SNX31Q8N9S9 440 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.15■□□□□ 0.34
HERC3-205ENST00000426683 GPR78Q96P69 363 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 CAPS2Q9BXY5 557 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 DRC3Q9H069 523 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 SLC26A1Q9H2B4 701 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 GPRC5BQ9NZH0 403 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 CTSFQ9UBX1 484 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 ANKRD12Q6UB98 2062 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 NBEAQ8NFP9 2946 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 ZFYVE26Q68DK2 2539 aa17.15■□□□□ 0.34
HERC3-205ENST00000426683 FAM208BQ5VWN6 2430 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 CCDC189A1A4V9 331 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 PRPF4O43172 522 aaKnown RBP eCLIP17.14■□□□□ 0.33
HERC3-205ENST00000426683 CCNT2O60583 730 aaKnown RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 SLC35G6P0C7Q6 338 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 C1GALT1C1LP0DN25 315 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 SNRPNP63162 240 aaKnown RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 FAM53BQ14153 422 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 SSPNQ14714 243 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 RBBP5Q15291 538 aaKnown RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 TMEM214Q6NUQ4 689 aaKnown RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 SLCO4C1Q6ZQN7 724 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 LRRC70Q7Z2Q7 622 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 RAB43Q86YS6 212 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 KCT2Q8NC54 265 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 ZCCHC10Q8TBK6 192 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 UBLCP1Q8WVY7 318 aaPredicted RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 MMABQ96EY8 250 aaPredicted RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 SPSB2Q99619 263 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 CD244Q9BZW8 370 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 SEMA4CQ9C0C4 833 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 SOX17Q9H6I2 414 aaPredicted RBP17.14■□□□□ 0.33
HERC3-205ENST00000426683 WDR54Q9H977 334 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 ZNF358Q9NW07 568 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 ZFP69BQ9UJL9 534 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 ASB1Q9Y576 335 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 HEATR5BQ9P2D3 2071 aa17.14■□□□□ 0.33
HERC3-205ENST00000426683 CHD6Q8TD26 2715 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 ARGFXA6NJG6 315 aa17.13■□□□□ 0.33
HERC3-205ENST00000426683 VSTM2BA6NLU5 285 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms