RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PACSIN2Q9UNF0 486 aaPredicted RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 RUVBL2Q9Y230 463 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 ZNF835Q9Y2P0 537 aa11.59□□□□□ -0.55
HLA-DQB3-203ENST00000425319 HIVEP3Q5T1R4 2406 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PCSK5Q92824 1860 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KCNE1BA0A087WTH5 132 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 URADA6NGE7 173 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GABRR3A8MPY1 467 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GOLGA6L6A8MZA4 724 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PRMT3O60678 531 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MED26O95402 600 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CELA2AP08217 269 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ERGP11308 486 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZNF24P17028 368 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NMBRP28336 390 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 BCL6P41182 706 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CYB561P49447 251 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 OR4D2P58180 307 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 HERC3Q15034 1050 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CCNG2Q16589 344 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SYT16Q17RD7 645 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZNF425Q6IV72 752 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NEPROQ6NW34 567 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MEX3BQ6ZN04 569 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MICALCLQ6ZW33 695 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GALNTL5Q7Z4T8 443 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PCGF5Q86SE9 256 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CDH24Q86UP0 819 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 C17orf64Q86WR6 236 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RPS19BP1Q86WX3 136 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC13A5Q86YT5 568 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 LMNTD2Q8IXW0 634 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 OR9A4Q8NGU2 314 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CALML6Q8TD86 181 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ADAMTS18Q8TE60 1221 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 C1orf54Q8WWF1 131 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC13A3Q8WWT9 602 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SDCCAG3Q96C92 435 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 HES6Q96HZ4 224 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 OR1F2PQ96R84 312 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 BAG1Q99933 345 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KIFC1Q9BW19 673 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TRIM54Q9BYV2 358 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 LACRTQ9GZZ8 138 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CDCP1Q9H5V8 836 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MCCC2Q9HCC0 563 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CCDC177Q9NQR7 707 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TREX1Q9NSU2 369 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PPT2Q9UMR5 302 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 COMMD10Q9Y6G5 202 aa11.58□□□□□ -0.56
HLA-DQB3-203ENST00000425319 A0A0U1RQJ8 604 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ARHGEF33A8MVX0 844 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 E7ENX8 843 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NIPSNAP2O75323 286 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC16A8O95907 504 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RPL22P35268 128 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RGS4P49798 205 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ADORA2A-AS1P86434 159 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PMP22Q01453 160 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TAP2Q03519 686 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 RPS6KA1Q15418 735 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 OASLQ15646 514 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SFT2D3Q587I9 215 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ACSBG2Q5FVE4 666 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CES4AQ5XG92 561 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 FCRLBQ6BAA4 426 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SPINK14Q6IE38 97 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PAPD4Q6PIY7 484 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ANKRD37Q7Z713 158 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CRLF3Q8IUI8 442 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 REXO1L1PQ8IX06 675 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PLPP5Q8NEB5 264 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 AGAP11Q8TF27 550 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZNF480Q8WV37 535 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 FAM136AQ96C01 138 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CCDC138Q96M89 665 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 BIRC8Q96P09 236 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 OLFM1Q99784 485 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MESP1Q9BRJ9 268 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TRIM8Q9BZR9 551 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ANKRD10Q9NXR5 420 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SOX13Q9UN79 622 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ZKSCAN5Q9Y2L8 839 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 KLF13Q9Y2Y9 288 aaPredicted RBP11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MAD1L1Q9Y6D9 718 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 POLEQ07864 2286 aa11.57□□□□□ -0.56
HLA-DQB3-203ENST00000425319 IGHV3-20A0A0C4DH32 117 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ASPDHA6ND91 283 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MAGEB17A8MXT2 336 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PSMD12O00232 456 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 HAT1O14929 419 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TFECO14948 347 aaPredicted RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MGAT1P26572 445 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PTGS2P35354 604 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SKIV2L2P42285 1042 aaKnown RBP11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CRADDP78560 199 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 ABRAXAS2Q15018 415 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TYSND1Q2T9J0 566 aa11.56□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CTSL3PQ5NE16 218 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms