RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 KRTAP9-2Q9BYQ4 174 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 PITPNM3Q9BZ71 974 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 EPS8L2Q9H6S3 715 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 LRRC40Q9H9A6 602 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 COG4Q9H9E3 785 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 MRM3Q9HC36 420 aaKnown RBP5.13□□□□□ -1.59
VPS8-205ENST00000424721 SMURF1Q9HCE7 757 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 ABHD10Q9NUJ1 306 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 NLE1Q9NVX2 485 aaPredicted RBP5.13□□□□□ -1.59
VPS8-205ENST00000424721 P4HTMQ9NXG6 502 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 SMARCAL1Q9NZC9 954 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 CDC14AQ9UNH5 594 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 TDRKHQ9Y2W6 561 aaKnown RBP5.13□□□□□ -1.59
VPS8-205ENST00000424721 PCDHA3Q9Y5H8 950 aa5.13□□□□□ -1.59
VPS8-205ENST00000424721 BOD1L1Q8NFC6 3051 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 IGLV3-16A0A075B6K0 115 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 MYOCOSA0A1B0GUC4 107 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 DYTNA2CJ06 578 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CCDC78A2IDD5 438 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ERI2A8K979 691 aaKnown RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 TARM1B6A8C7 271 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 F5H423 210 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 H7C0S8 307 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 BTN3A3O00478 584 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 BTN3A1O00481 513 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 TXNDC9O14530 226 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ZSCAN9O15535 394 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 PRPF4O43172 522 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS8-205ENST00000424721 HNRNPRO43390 633 aaKnown RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 KLF7O75840 302 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 SNUPNO95149 360 aaKnown RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 MLYCDO95822 493 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 AMY2AP04746 511 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 APOA4P06727 396 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CAPN1P07384 714 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CHRM5P08912 532 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 ST6GAL1P15907 406 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 AMY2BP19961 511 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 FDXRP22570 491 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 MMP11P24347 488 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CXCR2P25025 360 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ADRA1AP35348 466 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 UQCRFS1P47985 274 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 LMAN1P49257 510 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CASP6P55212 293 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 PPP1CAP62136 330 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 XIAPP98170 497 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 IRF9Q00978 393 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 FAPQ12884 760 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ATP1A4Q13733 1029 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 GRM7Q14831 915 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 NOMO1Q15155 1222 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 TMED2Q15363 201 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 PTCHD3Q3KNS1 767 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 MINDY4Q4G0A6 757 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 AARS2Q5JTZ9 985 aaKnown RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 CPZQ66K79 652 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 B3GNTL1Q67FW5 361 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 C11orf63Q6NUN7 778 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CDHR3Q6ZTQ4 885 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 VSTM4Q8IW00 320 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ADGRF3Q8IZF5 1079 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 SYCE1Q8N0S2 351 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 DNAAF3Q8N9W5 541 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ST6GALNAC3Q8NDV1 305 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 OR5K2Q8NHB8 316 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 SUN3Q8TAQ9 357 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CCDC110Q8TBZ0 833 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 FKBP10Q96AY3 582 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 RNF31Q96EP0 1072 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 RMDN2Q96LZ7 410 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 SPATA13Q96N96 652 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CARD6Q9BX69 1037 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 FRMD8P1Q9BZ68 369 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 OSBPL8Q9BZF1 889 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CD244Q9BZW8 370 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 LHPPQ9H008 270 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 SPRTNQ9H040 489 aaPredicted RBP5.12□□□□□ -1.59
VPS8-205ENST00000424721 OR52A5Q9H2C5 316 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 FAM96AQ9H5X1 160 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 WDR54Q9H977 334 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 SPTLC3Q9NUV7 552 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 ASF1BQ9NVP2 202 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 CDC23Q9UJX2 597 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 SLC39A10Q9ULF5 831 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 PCDHA13Q9Y5I0 950 aa5.12□□□□□ -1.59
VPS8-205ENST00000424721 RP1L1Q8IWN7 2480 aaPredicted RBP5.11□□□□□ -1.59
VPS8-205ENST00000424721 TRBV5-4A0A0C4DH59 114 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 A0A1B0GX78 115 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 MACROD2A1Z1Q3 448 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 ZNF839A8K0R7 811 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
VPS8-205ENST00000424721 MIF4GDA9UHW6 222 aaKnown RBP5.11□□□□□ -1.59
VPS8-205ENST00000424721 E7EVH7 732 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 GAPDHSO14556 408 aaPredicted RBP5.11□□□□□ -1.59
VPS8-205ENST00000424721 MFAP3LO75121 409 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 PRKD3O94806 890 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 LCA5LO95447 670 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 ONECUT2O95948 504 aa5.11□□□□□ -1.59
VPS8-205ENST00000424721 UQCRHP07919 91 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms