RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 HIGD2BQ4VC39 106 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 ARMC4Q5T2S8 1044 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 KRT39Q6A163 491 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 RPUSD3Q6P087 351 aaKnown RBP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 IQCHQ86VS3 1027 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 OR10G7Q8NGN6 311 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 NPRL2Q8WTW4 380 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 C1orf147Q96MC9 270 aaPredicted RBP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 CNOT10Q9H9A5 744 aaKnown RBP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 CPSF3Q9UKF6 684 aaKnown RBP3.18□□□□□ -1.9
LINC00397-201ENST00000422074 TSPAN16Q9UKR8 245 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 RNF150Q9ULK6 438 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 SELENOKQ9Y6D0 94 aa3.18□□□□□ -1.9
LINC00397-201ENST00000422074 A8MXK9 166 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 TLX2O43763 284 aaPredicted RBP3.17□□□□□ -1.9
LINC00397-201ENST00000422074 ATP5BP06576 529 aaKnown RBP3.17□□□□□ -1.9
LINC00397-201ENST00000422074 ERCC2P18074 760 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 BCL3P20749 454 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PCGF2P35227 344 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 ETV5P41161 510 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PRELPP51888 382 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 RALGDSQ12967 914 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PEX6Q13608 980 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 KYNUQ16719 465 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 C15orf32Q32M92 178 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 CRY2Q49AN0 593 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 C1orf141Q5JVX7 400 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 LCLAT1Q6UWP7 414 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 CHST3Q7LGC8 479 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PLPPR4Q7Z2D5 763 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 FAM131BQ86XD5 332 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 RCOR2Q8IZ40 523 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 GPC2Q8N158 579 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 KLHDC1Q8N7A1 406 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 SLC4A11Q8NBS3 891 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 OR6J1Q8NGC5 347 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 CHPT1Q8WUD6 406 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 VPS33AQ96AX1 596 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 HDAC11Q96DB2 347 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 SLC2A11Q9BYW1 496 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PUS3Q9BZE2 481 aaKnown RBP3.17□□□□□ -1.9
LINC00397-201ENST00000422074 OR10A4Q9H209 315 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 EGLN3Q9H6Z9 239 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 DNAJC4Q9NNZ3 241 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PFDN4Q9NQP4 134 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 WDR35Q9P2L0 1181 aa3.17□□□□□ -1.9
LINC00397-201ENST00000422074 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
LINC00397-201ENST00000422074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.16□□□□□ -1.9
LINC00397-201ENST00000422074 TRBV4-1A0A0J9YWV2 114 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 UBE2CO00762 179 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CLDN4O14493 209 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 SNX3O60493 162 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 TBX10O75333 385 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 BAG3O95817 575 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 FYNP06241 537 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CCDC175P0C221 793 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CYP11B2P19099 503 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 MC5RP33032 325 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CAPGP40121 348 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 RAB28P51157 221 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 OR1D5P58170 312 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 RASGEF1BQ0VAM2 473 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 ZNF177Q13360 481 aaPredicted RBP3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CAMK2DQ13557 499 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 OPCMLQ14982 345 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CST9LP1Q5W188 147 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 ZBTB49Q6ZSB9 765 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 DET1Q7L5Y6 550 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CHMP1BQ7LBR1 199 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 MFN1Q8IWA4 741 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 RYBPQ8N488 228 aaPredicted RBP3.16□□□□□ -1.9
LINC00397-201ENST00000422074 OR4D10Q8NGI6 311 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 ATP8B4Q8TF62 1192 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 CHURC1Q8WUH1 139 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 MRPS27Q92552 414 aaKnown RBP3.16□□□□□ -1.9
LINC00397-201ENST00000422074 PRRG4Q9BZD6 226 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 GPN1Q9HCN4 374 aaPredicted RBP3.16□□□□□ -1.9
LINC00397-201ENST00000422074 LNPEPQ9UIQ6 1025 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 IL16Q14005 1332 aa3.16□□□□□ -1.9
LINC00397-201ENST00000422074 MTMR11A4FU01 709 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 URADA6NGE7 173 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 H7C0S8 307 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 RNF103O00237 685 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 TRAFD1O14545 582 aaPredicted RBP3.15□□□□□ -1.91
LINC00397-201ENST00000422074 SPRY1O43609 319 aaPredicted RBP3.15□□□□□ -1.91
LINC00397-201ENST00000422074 TBCAO75347 108 aaKnown RBP3.15□□□□□ -1.91
LINC00397-201ENST00000422074 EEF1B2P24534 225 aaKnown RBP3.15□□□□□ -1.91
LINC00397-201ENST00000422074 PPP5CP53041 499 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 DCDC1P59894 354 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 ZFP36L1Q07352 338 aaKnown RBP3.15□□□□□ -1.91
LINC00397-201ENST00000422074 CD300CQ08708 224 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 MS4A18Q3C1V0 323 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 CCDC186Q7Z3E2 898 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 CENPVQ7Z7K6 275 aaPredicted RBP3.15□□□□□ -1.91
LINC00397-201ENST00000422074 HPS6Q86YV9 775 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 TOMM40LQ969M1 308 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 CFAP57Q96MR6 1250 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 ACTL8Q9H568 366 aa3.15□□□□□ -1.91
LINC00397-201ENST00000422074 HEXA-AS1Q9H8Q6 139 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms