RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 FAM156AQ8NDB6 213 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 C7orf26Q96N11 449 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM209Q96SK2 561 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 APOBEC3GQ9HC16 384 aaKnown RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 GIN1Q9NXP7 522 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 WASF3Q9UPY6 502 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 PDE10AQ9Y233 779 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 PCDHGA6Q9Y5G7 932 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 HS3ST4Q9Y661 456 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 FABP12A6NFH5 140 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 GATMP50440 423 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 LY6G5CQ5SRR4 150 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF227Q86WZ6 799 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 FCRL5Q96RD9 977 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 CD180Q99467 661 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TMED9Q9BVK6 235 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 OR8D2Q9GZM6 311 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 SNTG1Q9NSN8 517 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 A0A1B0GVT2 93 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 LCA5LO95447 670 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 FMO3P31513 532 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TYSND1Q2T9J0 566 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 P2RY8Q86VZ1 359 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 C1orf52Q8N6N3 182 aaKnown RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 CITED4Q96RK1 184 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 FZD8Q9H461 694 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 PIGVQ9NUD9 493 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 GLOD5A6NK44 160 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 SOX1O00570 391 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 CCNKO75909 580 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 ITIH1P19827 911 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 AKR1D1P51857 326 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 QPCTQ16769 361 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 YTHDF3Q7Z739 585 aaKnown RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 DNAJB8Q8NHS0 232 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 SLC5A11Q8WWX8 675 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 BORCS5Q969J3 196 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 CDKN2AIPNLQ96HQ2 116 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TMEM121BQ9BXQ6 578 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-205ENST00000418258 ERVK-18Q9QC07 812 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 RAP2AP10114 183 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 ID2Q02363 134 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 PIM3Q86V86 326 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 FOXRED2Q8IWF2 684 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 SPERTQ8NA61 448 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 OR4C15Q8NGM1 316 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 NFKBIDQ8NI38 313 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TGM7Q96PF1 710 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 RAD9AQ99638 391 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 TM9SF2Q99805 663 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 ST6GALNAC4Q9H4F1 302 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 SP140LQ9H930 580 aa10.9□□□□□ -0.66
PTCH1-205ENST00000418258 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 C2orf74A8MZ97 194 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 RPLP0P05388 317 aaKnown RBP10.9□□□□□ -0.67
PTCH1-205ENST00000418258 SYPP08247 313 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 SLC11A1P49279 550 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 PTP4A2Q12974 167 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 DNASE1L3Q13609 305 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 TMIGD1Q6UXZ0 262 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 OR9A1PQ8NGU1 263 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 GPR174Q9BXC1 333 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 TTYH3Q9C0H2 523 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 SFXN1Q9H9B4 322 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 GPR34Q9UPC5 381 aa10.9□□□□□ -0.67
PTCH1-205ENST00000418258 RPL36Q9Y3U8 105 aaKnown RBP10.9□□□□□ -0.67
PTCH1-205ENST00000418258 J3QLW9 94 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 VEGFDO43915 354 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 OAZ2O95190 189 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CH25HO95992 272 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 ZNF19P17023 458 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 RBMS1P29558 406 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PRDX6P30041 224 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 RBM48Q5RL73 367 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PDE7BQ9NP56 450 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PFKLP17858 780 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SMSP52788 366 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 RPS13P62277 151 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 OR10G2Q8NGC3 310 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 FBXL18Q96ME1 805 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SCGB3A2Q96PL1 93 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 IL21RQ9HBE5 538 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 KDELR3O43731 214 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CPNE6O95741 557 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 IRF2P14316 349 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CHRNB2P17787 502 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PDCD4Q53EL6 469 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 C22orf39Q6P5X5 142 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 CRELD2Q6UXH1 353 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 C14orf166Q9Y224 244 aaKnown RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 Q9Y3F1 56 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 DNMT3AQ9Y6K1 912 aaPredicted RBP10.89□□□□□ -0.67
PTCH1-205ENST00000418258 MYH7BA7E2Y1 1941 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 SLIT2O94813 1529 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
PTCH1-205ENST00000418258 PLOD2O00469 737 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms