RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 TESMINQ9Y4I5 508 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ARHGEF33A8MVX0 844 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TNFRSF11BO00300 401 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SCAMP2O15127 329 aaKnown RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ADAMDEC1O15204 470 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TGM5O43548 720 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TSPAN6O43657 245 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CXCL10P02778 98 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HSD3B1P14060 373 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HSD3B2P26439 372 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 RRM2P31350 389 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PPM1AP35813 382 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CSNK2BP67870 215 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC35A2P78381 396 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SMN1Q16637 294 aaKnown RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PROX2Q3B8N5 592 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SPIN4Q56A73 249 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 UTP15Q8TED0 518 aaKnown RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CAPNS2Q96L46 248 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GABARAPL1Q9H0R8 117 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PPIL1Q9Y3C6 166 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PCDHGA10Q9Y5H3 936 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 THSD7BQ9C0I4 1608 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PCDH7O60245 1069 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GABARAPO95166 117 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CD36P16671 472 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CHI3L1P36222 383 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BCAP31P51572 246 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ITGA1P56199 1179 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAD2L1BPQ15013 274 aaPredicted RBP11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 INAQ16352 499 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NIPAL1Q6NVV3 410 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MED27Q6P2C8 311 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HSD11B1LQ7Z5J1 315 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PLPP6Q8IY26 295 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAL2Q969L2 176 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FKBP10Q96AY3 582 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 COPS4Q9BT78 406 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SPATA9Q9BWV2 254 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAFFQ9ULX9 164 aa11.3□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 H3BM21 787 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC16A8O95907 504 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ELFN1P0C7U0 828 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PCMT1P22061 227 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 FSHRP23945 695 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SOAT1P35610 550 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TLE2Q04725 743 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZXDCQ2QGD7 858 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC16A12Q6ZSM3 486 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TBC1D20Q96BZ9 403 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 AP2M1Q96CW1 435 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DUSP21Q9H596 190 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 STOX2Q9P2F5 926 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PCDHGB1Q9Y5G3 927 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEM247A6NEH6 219 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GABRR3A8MPY1 467 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CCL16O15467 120 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 LEFTY1O75610 366 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MAPK9P45984 424 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 BDKRB1P46663 353 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CASP9P55211 416 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ELP6Q0PNE2 266 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CTF1Q16619 201 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GRHL2Q6ISB3 625 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ERAP2Q6P179 960 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 OR52J3Q8NH60 311 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HUS1BQ8NHY5 278 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NDNFQ8TB73 568 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 MYDGFQ969H8 173 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TAMM41Q96BW9 452 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 METTL2AQ96IZ6 378 aaKnown RBP11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HHIPL1Q96JK4 782 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 DOHHQ9BU89 302 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SLC46A2Q9BY10 475 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PNMA8BQ9ULN7 279 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 HTTP42858 3142 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 CARNS1A5YM72 827 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PRAMEF4O60810 478 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 EFEMP2O95967 443 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 IFNA14P01570 189 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ADH1AP07327 375 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 NUDT7P0C024 238 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TYRP14679 529 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 JUNDP17535 347 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 GRK3P35626 688 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 SPIBQ01892 262 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 LRRC74AQ0VAA2 488 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PRAMEF9Q5VWM5 478 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 LAIR2Q6ISS4 152 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TMEM220Q6QAJ8 160 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PRSS48Q7RTY5 328 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PAGE2Q7Z2X7 111 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 ZNF551Q7Z340 670 aaPredicted RBP11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 PTOV1Q86YD1 416 aa11.29□□□□□ -0.6
CSPG4P3Y-201ENST00000418188 TAGAPQ8N103 731 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms