RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 C10orf107Q8IVU9 208 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 HIPK4Q8NE63 616 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 TRPC4APQ8TEL6 797 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 JPH3Q8WXH2 748 aaPredicted RBP13.99□□□□□ -0.17
SGCE-202ENST00000415788 RHBDF1Q96CC6 855 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 CNDP1Q96KN2 507 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 IL17FQ96PD4 163 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 HAUS8Q9BT25 410 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 TWSG1Q9GZX9 223 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 ABCG4Q9H172 646 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 HRASLS2Q9NWW9 162 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 EPHA6Q9UF33 1036 aa13.99□□□□□ -0.17
SGCE-202ENST00000415788 PIPSLA2A3N6 862 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 C2orf74A8MZ97 194 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 E7ENX8 843 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 TK2O00142 265 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 ZSCAN9O15535 394 aaPredicted RBP13.98□□□□□ -0.17
SGCE-202ENST00000415788 KLK8O60259 260 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 SORBS2O94875 1100 aaKnown RBP13.98□□□□□ -0.17
SGCE-202ENST00000415788 CPNE6O95741 557 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 CHRM5P08912 532 aaPredicted RBP13.98□□□□□ -0.17
SGCE-202ENST00000415788 MTHFD2P13995 350 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 TYRP1P17643 537 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 CD1CP29017 333 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 PPM1FP49593 454 aaPredicted RBP13.98□□□□□ -0.17
SGCE-202ENST00000415788 TAP2Q03519 686 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 RSPO4Q2I0M5 234 aaPredicted RBP13.98□□□□□ -0.17
SGCE-202ENST00000415788 MBOAT1Q6ZNC8 495 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 PLXDC1Q8IUK5 500 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 ADGRF3Q8IZF5 1079 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 TMEM151AQ8N4L1 468 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 METTL25Q8N6Q8 603 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 ZFP28Q8NHY6 868 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 RDH11Q8TC12 318 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 RSC1A1Q92681 617 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 EXT2Q93063 718 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 ZDHHC12Q96GR4 267 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 PCBD2Q9H0N5 130 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 UBAP1Q9NZ09 502 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 GVINP1Q7Z2Y8 2422 aa13.98□□□□□ -0.17
SGCE-202ENST00000415788 A0A1W2PQM1 296 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 KRT87PA6NCN2 255 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 NCF1BA6NI72 391 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 NCF1CA8MVU1 366 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 TARM1B6A8C7 271 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 UBXN8O00124 270 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 BTN3A3O00478 584 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 NTN3O00634 580 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 GFAPP14136 432 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 NCF1P14598 390 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 GGT5P36269 586 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 NOVA1P51513 510 aaKnown RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 CCL7P80098 99 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 AMZ1Q400G9 498 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 CAPN13Q6MZZ7 669 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 LINC01555Q8NAE3 123 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 RP9Q8TA86 221 aaKnown RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 GFM1Q96RP9 751 aaKnown RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 CD180Q99467 661 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 CCDC177Q9NQR7 707 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 TOR4AQ9NXH8 423 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 WWOXQ9NZC7 414 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 RIMS3Q9UJD0 308 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 PTBP2Q9UKA9 531 aaKnown RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 A0A0J9YVX5 310 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 LOC100653049A0A140TA62 436 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 GSAPA4D1B5 854 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 KRT34O76011 436 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 DKK1O94907 266 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 FKBP9O95302 570 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 SIM1P81133 766 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 MYBPC1Q00872 1141 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 SPIDRQ14159 915 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 HERC3Q15034 1050 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 NKAIN2Q5VXU1 208 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 METTL2BQ6P1Q9 378 aaKnown RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 CROCCP3Q8IVE0 287 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 SLC22A9Q8IVM8 553 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 LRRC56Q8IYG6 542 aaPredicted RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 CARFQ8N187 725 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 FBXO39Q8N4B4 442 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 OR56A3Q8NH54 315 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 UBTD2Q8WUN7 234 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 CCDC126Q96EE4 140 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 GRIP2Q9C0E4 1043 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 ACTR10Q9NZ32 417 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 PCDHB11Q9Y5F2 797 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 TNPO3Q9Y5L0 923 aaKnown RBP13.97□□□□□ -0.17
SGCE-202ENST00000415788 AK5Q9Y6K8 562 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 DNAH14Q0VDD8 3507 aa13.97□□□□□ -0.17
SGCE-202ENST00000415788 MN1Q10571 1320 aaPredicted RBP13.96□□□□□ -0.17
SGCE-202ENST00000415788 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.17
SGCE-202ENST00000415788 STX16-NPEPL1H3BU86 382 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 STX16O14662 325 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 C9P02748 559 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 SBK3P0C264 359 aa13.96□□□□□ -0.17
SGCE-202ENST00000415788 POLR2CP19387 275 aaPredicted RBP13.96□□□□□ -0.17
SGCE-202ENST00000415788 ATP5F1P24539 256 aaPredicted RBP13.96□□□□□ -0.17
SGCE-202ENST00000415788 TBPL1P62380 186 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms