RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 C7orf34Q96L11 122 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 CCM2Q9BSQ5 444 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 SP140LQ9H930 580 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 FZD4Q9ULV1 537 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 MAGEB17A8MXT2 336 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 ETHE1O95571 254 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 KRT6AP02538 564 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 KRT6BP04259 564 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 DGKAP23743 735 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 ATP5C1P36542 298 aaKnown RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 KRT6CP48668 564 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 UBE2R2Q712K3 238 aaPredicted RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 GPR26Q8NDV2 337 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 OR5AK3PQ8NH89 298 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 FAM193BQ96PV7 902 aaPredicted RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 IL4I1Q96RQ9 567 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 CDK5RAP1Q96SZ6 601 aaKnown RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 TIGARQ9NQ88 270 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 TBC1D14Q9P2M4 693 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 TMEM98Q9Y2Y6 226 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 NINQ8N4C6 2090 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 SLC38A8A6NNN8 435 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 H3BQ06 376 aaPredicted RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 SAP18O00422 153 aaKnown RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 PCDH17O14917 1159 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 HAT1O14929 419 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 HOXC11O43248 304 aaPredicted RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 TBL1XO60907 577 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 EPN2O95208 641 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 ASGR1P07306 291 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 CD22P20273 847 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 FADDQ13158 208 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 IER5LQ5T953 404 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 MMAAQ8IVH4 418 aaKnown RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 SLC44A2Q8IWA5 706 aaPredicted RBP14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 B3GNT7Q8NFL0 401 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 PIH1D2Q8WWB5 315 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 NELL1Q92832 810 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 P2RY13Q9BPV8 354 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 CEP44Q9C0F1 390 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 GABARAPL1Q9H0R8 117 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 TPT1P8Q9HAU6 139 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 TBC1D24Q9ULP9 559 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 CLEC4EQ9ULY5 219 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 CDH23Q9H251 3354 aa14.09□□□□□ -0.15
SEMA3F-202ENST00000413852 LOC110117498-PIK3R3F6TDL0 507 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 TNFRSF11BO00300 401 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 HLA-EP13747 358 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 ETFAP13804 333 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 AMD1P17707 334 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 HMGCLP35914 325 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 RGS6P49758 472 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 DUOXA1Q1HG43 343 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 EXOC3L2Q2M3D2 409 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 ZNF181Q2M3W8 571 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 FAHD1Q6P587 224 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 ABI3BPQ7Z7G0 1075 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SLC22A12Q96S37 553 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 NTMT1Q9BV86 223 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 ARHGAP39Q9C0H5 1083 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 TRIM39Q9HCM9 518 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 MAN2B2Q9Y2E5 1009 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CASP8AP2Q9UKL3 1982 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 PDZK1P1A8MUH7 402 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 STC2O76061 302 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 KRT75O95678 551 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 C9P02748 559 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SEMG1P04279 462 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 RPLP0P05388 317 aaKnown RBP14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CDK1P06493 297 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CXCR2P25025 360 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SSTR4P31391 388 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SLC11A2P49281 568 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CXCR4P61073 352 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SPIBQ01892 262 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 TSTA3Q13630 321 aaPredicted RBP14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SNAP47Q5SQN1 464 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CBLL1Q75N03 491 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 KIAA1958Q8N8K9 716 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 GTF3C2Q8WUA4 911 aaPredicted RBP14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 EFHD2Q96C19 240 aaPredicted RBP14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 TRMT61AQ96FX7 289 aaKnown RBP14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 MYO19Q96H55 970 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 SAMD11Q96NU1 681 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 TRPS1Q9UHF7 1281 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CLEC2DQ9UHP7 191 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 DNMT3LQ9UJW3 386 aa14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 CFAP20Q9Y6A4 193 aaKnown RBP14.08□□□□□ -0.16
SEMA3F-202ENST00000413852 VWA8A3KMH1 1905 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 TAF4O00268 1085 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 SCN2BO60939 215 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 CSF2P04141 144 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 KRT8P05787 483 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 ACRV1P26436 265 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 CSKP41240 450 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 CRATP43155 626 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 B4GALNT1Q00973 533 aa14.07□□□□□ -0.16
SEMA3F-202ENST00000413852 CHIT1Q13231 466 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms