RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 FAM220AQ7Z4H9 259 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 CHST14Q8NCH0 376 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 PKP4Q99569 1192 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 OSBPL10Q9BXB5 764 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 TOR3AQ9H497 397 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 SMURF2Q9HAU4 748 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 SMCHD1A6NHR9 2005 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 NME4O00746 187 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 CASKO14936 926 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 NDUFS4O43181 175 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 BCHEP06276 602 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 ATXN1LP0C7T5 689 aaKnown RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 MYL9P24844 172 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 GABRB3P28472 473 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 VEGFBP49765 207 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 OR4D2P58180 307 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 DOC2AQ14183 400 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 SNAP47Q5SQN1 464 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 OGFOD2Q6N063 350 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 RTL4Q6ZR62 310 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 RANBP3LQ86VV4 465 aaPredicted RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 ERI1Q8IV48 349 aaKnown RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 CBARPQ8N350 705 aaPredicted RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 MARVELD2Q8N4S9 558 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 COX18Q8N8Q8 333 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 NFKBIDQ8NI38 313 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 REEP4Q9H6H4 257 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 TVP23BQ9NYZ1 205 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 PLAGL1Q9UM63 463 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 URB1O60287 2271 aaKnown RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 LOC110117498-PIK3R3F6TDL0 507 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 C8BP07358 591 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 C1GALT1C1LP0DN25 315 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 ITPKBP27987 946 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 IL12AP29459 219 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 RYKP34925 604 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 MS4A2Q01362 244 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 GRM2Q14416 872 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 TLR1Q15399 786 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 CYP4V2Q6ZWL3 525 aaPredicted RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 ZNF483Q8TF39 744 aaPredicted RBP11.59□□□□□ -0.55
ABCA13-201ENST00000411975 RAB7BQ96AH8 199 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 CAMK1GQ96NX5 476 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 YIPF4Q9BSR8 244 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 RNF38Q9H0F5 515 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 TM9SF3Q9HD45 589 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 SNX7Q9UNH6 387 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 POFUT2Q9Y2G5 429 aa11.59□□□□□ -0.55
ABCA13-201ENST00000411975 NPIPB15A6NHN6 443 aaPredicted RBP11.58□□□□□ -0.55
ABCA13-201ENST00000411975 CHURC1-FNTBB4DL54 471 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 TNFRSF10BO14763 440 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 PAK4O96013 591 aaPredicted RBP11.58□□□□□ -0.55
ABCA13-201ENST00000411975 RPS17P08708 135 aaKnown RBP11.58□□□□□ -0.55
ABCA13-201ENST00000411975 HOXB2P14652 356 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 BLKP51451 505 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 FOXA1P55317 472 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 CLDN8P56748 225 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 C18orf21Q32NC0 220 aaPredicted RBP11.58□□□□□ -0.55
ABCA13-201ENST00000411975 IQCCQ4KMZ1 466 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 CYBRD1Q53TN4 286 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 MPP7Q5T2T1 576 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 LETMD1Q6P1Q0 360 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 TMPRSS11AQ6ZMR5 421 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 GALNT7Q86SF2 657 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 TRMT2BQ96GJ1 504 aaKnown RBP11.58□□□□□ -0.55
ABCA13-201ENST00000411975 RDH12Q96NR8 316 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 PCDHGA7Q9Y5G6 932 aa11.58□□□□□ -0.55
ABCA13-201ENST00000411975 XIRP1Q702N8 1843 aaKnown RBP11.58□□□□□ -0.56
ABCA13-201ENST00000411975 ALPPP05187 535 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 HOXD9P28356 352 aaPredicted RBP11.58□□□□□ -0.56
ABCA13-201ENST00000411975 BMPR1AP36894 532 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 CLK3P49761 638 aaKnown RBP11.58□□□□□ -0.56
ABCA13-201ENST00000411975 SLC14A2Q15849 920 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 ITPRIPL2Q3MIP1 535 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 LCN8Q6JVE9 175 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 CXXC5Q7LFL8 322 aaKnown RBP11.58□□□□□ -0.56
ABCA13-201ENST00000411975 CLEC14AQ86T13 490 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 CADM2Q8N3J6 435 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 RFKQ969G6 155 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 KCNC2Q96PR1 638 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 CLDND1Q9NY35 253 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 UTS2RQ9UKP6 389 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 HOXC13P31276 330 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 TIA1P31483 386 aaKnown RBP eCLIP11.58□□□□□ -0.56
ABCA13-201ENST00000411975 LAPTM4AQ15012 233 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 VMACQ2NL98 169 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 MINDY4Q4G0A6 757 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 PYDC2Q56P42 97 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 NADSYN1Q6IA69 706 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 HMGB4Q8WW32 186 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 IL1RAPQ9NPH3 570 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 MRTO4Q9UKD2 239 aaKnown RBP11.58□□□□□ -0.56
ABCA13-201ENST00000411975 ACSL5Q9ULC5 683 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 HAT1O14929 419 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 SNAP29O95721 258 aa11.58□□□□□ -0.56
ABCA13-201ENST00000411975 H1F0P07305 194 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms