RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 FAM159AQ6UWV7 190 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 OTUD6AQ7L8S5 288 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 TMPRSS12Q86WS5 348 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 CROCCP3Q8IVE0 287 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.6□□□□□ -1.67
LSM5-205ENST00000409952 TRIM58Q8NG06 486 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 OR6C4Q8NGE1 309 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 OR52I2Q8NH67 350 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 OR5R1Q8NH85 324 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 WFIKKN2Q8TEU8 576 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 DAZLQ92904 295 aaKnown RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 RFT1Q96AA3 541 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 FAM71F1Q96KD3 344 aaPredicted RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 FAM84BQ96KN1 310 aaPredicted RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 TIMP4Q99727 224 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 CMKLR1Q99788 373 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 TRMT61BQ9BVS5 477 aaKnown RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 CAPS2Q9BXY5 557 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 POLDIP3Q9BY77 421 aaKnown RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 DCLRE1BQ9H816 532 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 UPF2Q9HAU5 1272 aaKnown RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 CRLF2Q9HC73 371 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 YAE1D1Q9NRH1 226 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 PHPT1Q9NRX4 125 aaPredicted RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 TCP11L1Q9NUJ3 509 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 COPS7AQ9UBW8 275 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 CHMP2BQ9UQN3 213 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 TMED3Q9Y3Q3 217 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 YIPF1Q9Y548 306 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 COX11Q9Y6N1 276 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 ATXN2Q99700 1313 aaKnown RBP4.6□□□□□ -1.67
LSM5-205ENST00000409952 DISP3Q9P2K9 1392 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 PRAG1Q86YV5 1406 aa4.6□□□□□ -1.67
LSM5-205ENST00000409952 A0A0G2JK05 382 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 A6NNC1 897 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 E9PBE3 544 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 MDM4O15151 490 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ABCC4O15439 1325 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 BAG3O95817 575 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 CHRNGP07510 517 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 HMBSP08397 361 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 NHLRC4P0CG21 123 aaPredicted RBP4.59□□□□□ -1.67
LSM5-205ENST00000409952 RRASP10301 218 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 WT1P19544 449 aaPredicted RBP4.59□□□□□ -1.67
LSM5-205ENST00000409952 CYP3A5P20815 502 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ATP6V1C1P21283 382 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 GNLYP22749 145 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ADRA1AP35348 466 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 GLIPR1P48060 266 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 TNFSF10P50591 281 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 SELENOVP59797 346 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 FKBP1BP68106 108 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 RASGEF1BQ0VAM2 473 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 DMP1Q13316 513 aaPredicted RBP4.59□□□□□ -1.67
LSM5-205ENST00000409952 ZNF284Q2VY69 593 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 UGT3A2Q3SY77 523 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 PRAMEF17Q5VTA0 474 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 IL23RQ5VWK5 629 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 PMF1Q6P1K2 205 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 LINGO4Q6UY18 593 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ZNF793Q6ZN11 406 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 DEF8Q6ZN54 512 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 TECPR1Q7Z6L1 1165 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 AMIGO2Q86SJ2 522 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 GRAMD2AQ8IUY3 354 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 BBS5Q8N3I7 341 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 CCDC63Q8NA47 563 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 SLC44A5Q8NCS7 719 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ENGASEQ8NFI3 743 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 OR4K1Q8NGD4 311 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ZNF671Q8TAW3 534 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 AGR3Q8TD06 166 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 SAP25Q8TEE9 199 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 RLN3Q8WXF3 142 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 PIGBQ92521 554 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 SEMA4DQ92854 862 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 FBXO32Q969P5 355 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 PIWIL1Q96J94 861 aaKnown RBP4.59□□□□□ -1.67
LSM5-205ENST00000409952 GUCD1Q96NT3 240 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 PRMT1Q99873 361 aaKnown RBP4.59□□□□□ -1.67
LSM5-205ENST00000409952 NTMT1Q9BV86 223 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 DPEP3Q9H4B8 488 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ACTL8Q9H568 366 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 WDR76Q9H967 626 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 COG4Q9H9E3 785 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 ACOXLQ9NUZ1 547 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 HOXC10Q9NYD6 342 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 C6orf203Q9P0P8 240 aaPredicted RBP4.59□□□□□ -1.67
LSM5-205ENST00000409952 VPS54Q9P1Q0 977 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 KLHL9Q9P2J3 617 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 CHRNA9Q9UGM1 479 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 NARFQ9UHQ1 456 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 BAIAP2L1Q9UHR4 511 aa4.59□□□□□ -1.67
LSM5-205ENST00000409952 PTPRCP08575 1304 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 ANKRD30BLA7E2S9 258 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 C15orf62A8K5M9 175 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 PRR32B1ATL7 298 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 H0YIV9 168 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 L7N2F9 121 aa4.58□□□□□ -1.68
LSM5-205ENST00000409952 MGST3O14880 152 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms