RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TECRLQ5HYJ1 363 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 CATSPEREQ5SY80 951 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 MLIPQ5VWP3 458 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 LCA5Q86VQ0 697 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 RAB43Q86YS6 212 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 KRT78Q8N1N4 520 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 SNX31Q8N9S9 440 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 TTLQ8NG68 377 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 OR4K1Q8NGD4 311 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 ACMSDQ8TDX5 336 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 UBTD2Q8WUN7 234 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 COL26A1Q96A83 441 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 SCYL1Q96KG9 808 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 C10orf90Q96M02 699 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 PITHD1Q9GZP4 211 aaPredicted RBP10.4□□□□□ -0.74
CHMP3-205ENST00000409810 DRC3Q9H069 523 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 AKIRIN1Q9H9L7 192 aaPredicted RBP10.4□□□□□ -0.74
CHMP3-205ENST00000409810 OPTCQ9UBM4 332 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 NXT1Q9UKK6 140 aaKnown RBP10.4□□□□□ -0.74
CHMP3-205ENST00000409810 TCFL5Q9UL49 500 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 POLHQ9Y253 713 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 CACNA1GO43497 2377 aa10.4□□□□□ -0.74
CHMP3-205ENST00000409810 NUP210LQ5VU65 1888 aa10.4□□□□□ -0.75
CHMP3-205ENST00000409810 CDC14CA4D256 554 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 URADA6NGE7 173 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 MAP2K7O14733 419 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 NKX2-8O15522 239 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 NDUFS4O43181 175 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 SMIM24O75264 130 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ONECUT2O95948 504 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 FBLP22087 321 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 HPDP32754 393 aaPredicted RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 GMPRP36959 345 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 BCL6P41182 706 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 FOLR3P41439 243 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 GDF5P43026 501 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 SCTRP47872 440 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 AVPR1BP47901 424 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 PIK3CGP48736 1102 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ALDH18A1P54886 795 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 RPS18P62269 152 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 OCA2Q04671 838 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 LAPTM5Q13571 262 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ERV3-1Q14264 604 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 UGT8Q16880 541 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ERCC6LQ2NKX8 1250 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 HKDC1Q2TB90 917 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 C18orf21Q32NC0 220 aaPredicted RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 PAGE2BQ5JRK9 111 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ATG9BQ674R7 924 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 LCN10Q6JVE6 187 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 NIPAL1Q6NVV3 410 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 METTL2BQ6P1Q9 378 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 BORAQ6PGQ7 559 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 VN1R4Q7Z5H5 301 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 TDRPQ86YL5 185 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 PLD6Q8N2A8 252 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 RIBC1Q8N443 379 aaPredicted RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 AENQ8WTP8 325 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 SLC13A3Q8WWT9 602 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 THAP4Q8WY91 577 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 SEC16BQ96JE7 1060 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 MRPL57Q9BQC6 102 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ARHGAP9Q9BRR9 750 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 CD244Q9BZW8 370 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 EHD1Q9H4M9 534 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ZNF304Q9HCX3 659 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 CPSF2Q9P2I0 782 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 XPR1Q9UBH6 696 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 TBK1Q9UHD2 729 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ZFP69BQ9UJL9 534 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 ANGPTL3Q9Y5C1 460 aa10.39□□□□□ -0.75
CHMP3-205ENST00000409810 TNPO3Q9Y5L0 923 aaKnown RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 V9GYY5 206 aaPredicted RBP10.39□□□□□ -0.75
CHMP3-205ENST00000409810 K7EPI3 171 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 P2RX6O15547 441 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 KLK8O60259 260 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 CDH16O75309 829 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 NSA2O95478 260 aaKnown RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SERPIND1P05546 499 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 CAPN1P07384 714 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 ATXN8OSP0DMR3 200 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 C1GALT1C1LP0DN25 315 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 MTHFD2P13995 350 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 EPB42P16452 691 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 KRT15P19012 456 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 ITGAXP20702 1163 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 HSD17B3P37058 310 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 CCR10P46092 362 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 OR1D4P47884 311 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 KCNC1P48547 511 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 CYP4F2P78329 520 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 MEF2AQ02078 507 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 PWP1Q13610 501 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SLBPQ14493 270 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 NAA30Q147X3 362 aaPredicted RBP10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SLC9A5Q14940 896 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 HERC3Q15034 1050 aa10.38□□□□□ -0.75
CHMP3-205ENST00000409810 SETDB1Q15047 1291 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms