RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 TRAV17A0A0B4J275 112 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 PER3P56645 1201 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 DHX9Q08211 1270 aaKnown RBP13.97□□□□□ -0.17
CBX3-203ENST00000409747 SYT16Q17RD7 645 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 FAAH2Q6GMR7 532 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 AGTRAPQ6RW13 159 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 VN1R4Q7Z5H5 301 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 OR1N1Q8NGS0 311 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 OR9A4Q8NGU2 314 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 PSMF1Q92530 271 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 LINGO1Q96FE5 620 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 CERS2Q96G23 380 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 HAUS8Q9BT25 410 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 OLAHQ9NV23 265 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 TEKT2Q9UIF3 430 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 ADAMTS6Q9UKP5 1117 aa13.97□□□□□ -0.17
CBX3-203ENST00000409747 E2F3O00716 465 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 SLC35G6P0C7Q6 338 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 MYBL2P10244 700 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 TCP1P17987 556 aaKnown RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 TNFSF10P50591 281 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 AP1S2P56377 157 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 IL2P60568 153 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 CSNK1G2P78368 415 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 MAT1AQ00266 395 aaKnown RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 PDAP1Q13442 181 aaKnown RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 PCOLCEQ15113 449 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 MFSD4BQ5TF39 518 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 CAPN13Q6MZZ7 669 aaPredicted RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 TMEM214Q6NUQ4 689 aaKnown RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 PAQR3Q6TCH7 311 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 LCTLQ6UWM7 567 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 SIRT6Q8N6T7 355 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 HAS2Q92819 552 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 RUNDC3BQ96NL0 473 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 SGPP1Q9BX95 441 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 TRIM54Q9BYV2 358 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 RNF32Q9H0A6 362 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 DDX47Q9H0S4 455 aaKnown RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 ANKHQ9HCJ1 492 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 PPANQ9NQ55 473 aaKnown RBP13.96□□□□□ -0.17
CBX3-203ENST00000409747 TEX15Q9BXT5 2789 aa13.96□□□□□ -0.17
CBX3-203ENST00000409747 SKP1P63208 163 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 NAE1Q13564 534 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 BBS9Q3SYG4 887 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 MINDY4Q4G0A6 757 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 ABHD17BQ5VST6 288 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 HIST2H2BCQ6DN03 193 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 SYDE1Q6ZW31 735 aaPredicted RBP13.95□□□□□ -0.18
CBX3-203ENST00000409747 ASPGQ86U10 573 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 PDIK1LQ8N165 341 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 TBC1D19Q8N5T2 526 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 CATSPER1Q8NEC5 780 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 SUN3Q8TAQ9 357 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 ATL1Q8WXF7 558 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 ALKBH8Q96BT7 664 aaKnown RBP13.95□□□□□ -0.18
CBX3-203ENST00000409747 MAGEB10Q96LZ2 347 aaPredicted RBP13.95□□□□□ -0.18
CBX3-203ENST00000409747 SLX1AQ9BQ83 275 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 VN1R1Q9GZP7 353 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 ATG10Q9H0Y0 220 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 AHSGP02765 367 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 BCL6P41182 706 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 XCR1P46094 333 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 AGTR2P50052 363 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 CDKN2DP55273 166 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 TIAL1Q01085 375 aaKnown RBP eCLIP13.95□□□□□ -0.183e-11■■□□□ 13.3
CBX3-203ENST00000409747 MORF4L2Q15014 288 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 RBM20Q5T481 1227 aaKnown RBP13.95□□□□□ -0.18
CBX3-203ENST00000409747 FAM45BPQ6NSW5 357 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 NIPAL1Q6NVV3 410 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 MBOAT1Q6ZNC8 495 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 CPAMD8Q8IZJ3 1885 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 OR51Q1Q8NH59 317 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 FAM45AQ8TCE6 357 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 SLC13A3Q8WWT9 602 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 LRRC39Q96DD0 335 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 TM4SF19Q96DZ7 209 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.95□□□□□ -0.18
CBX3-203ENST00000409747 ARL15Q9NXU5 204 aa13.95□□□□□ -0.18
CBX3-203ENST00000409747 STATHP02808 62 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 ENO2P09104 434 aaPredicted RBP13.94□□□□□ -0.18
CBX3-203ENST00000409747 ITGAMP11215 1152 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 CDH1P12830 882 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 IL1RNP18510 177 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 IL10P22301 178 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 GABRB3P28472 473 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 CCR8P51685 355 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 HERC3Q15034 1050 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 DUPD1Q68J44 220 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 HIBCHQ6NVY1 386 aaPredicted RBP13.94□□□□□ -0.18
CBX3-203ENST00000409747 CPEB2Q7Z5Q1 589 aaKnown RBP13.94□□□□□ -0.18
CBX3-203ENST00000409747 SPNS2Q8IVW8 549 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 GPATCH11Q8N954 259 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 MFSD9Q8NBP5 474 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 ZCCHC10Q8TBK6 192 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 IMMP1LQ96LU5 166 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 CYTH2Q99418 400 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 PLA2G3Q9NZ20 509 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 HCN3Q9P1Z3 774 aa13.94□□□□□ -0.18
CBX3-203ENST00000409747 OSGIN2Q9Y236 505 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms