RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 SPTBN4Q9H254 2564 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 LOC105369274A0A096LPK9 316 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 LOC102723532A0A0G2JNH3 316 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 A0A1B0GTL3 188 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 PMS2P1A4D2B8 440 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 TMEM114B3SHH9 223 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 H0YGG7 62 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 H0YIV9 168 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 H3BMH7 237 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 UBFD1O14562 309 aaKnown RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 POLR1CO15160 346 aaPredicted RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 OR1F1O43749 312 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ESRRBO95718 433 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ADRB1P08588 477 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 NEFHP12036 1026 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 BGNP21810 368 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 GRK2P25098 689 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ETV5P41161 510 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ITGA1P56199 1179 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ERVPABLB-1P60509 514 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ARF3P61204 181 aaPredicted RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 TCTE1Q5JU00 501 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 LETMD1Q6P1Q0 360 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 MED27Q6P2C8 311 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 IGF2-ASQ6U949 168 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 VN1R4Q7Z5H5 301 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 SYVN1Q86TM6 617 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 MYLK4Q86YV6 388 aaPredicted RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 TRIM42Q8IWZ5 723 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 OR4N4Q8N0Y3 316 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ARFGAP2Q8N6H7 521 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ANKRD53Q8N9V6 530 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 OR1L3Q8NH93 324 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 RERGQ96A58 199 aaPredicted RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 PRR11Q96HE9 360 aaPredicted RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 TAAR9Q96RI9 348 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 DDA1Q9BW61 102 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 B3GNT4Q9C0J1 378 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 NRSN2Q9GZP1 204 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 APMAPQ9HDC9 416 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 MID1IP1Q9NPA3 183 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ZFP69BQ9UJL9 534 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 SERTAD3Q9UJW9 196 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 KLK13Q9UKR3 277 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 ZNF490Q9ULM2 529 aaPredicted RBP15.89■□□□□ 0.13
SUMO1-208ENST00000409627 TSC22D4Q9Y3Q8 395 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 NEUROG3Q9Y4Z2 214 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 PCDHGA11Q9Y5H2 935 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 AP1M2Q9Y6Q5 423 aa15.89■□□□□ 0.13
SUMO1-208ENST00000409627 SPEGQ15772 3267 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 OR4F21O95013 312 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 SNUPNO95149 360 aaKnown RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 ENO1P06733 434 aaKnown RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 SERPINB1P30740 379 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 CCR10P46092 362 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 MAPK10P53779 464 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 VSX2P58304 361 aaPredicted RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 GABREP78334 506 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 RBBP5Q15291 538 aaKnown RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 ASPGQ86U10 573 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 PPP1R3BQ86XI6 285 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 LSMEM2Q8N112 164 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 TRPV3Q8NET8 790 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 REPS1Q96D71 796 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 TM4SF19Q96DZ7 209 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 TEFMQ96QE5 360 aaKnown RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 ZPBPQ9BS86 351 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 SCNM1Q9BWG6 230 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 SLC29A3Q9BZD2 475 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 RHBGQ9H310 441 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 EML4Q9HC35 981 aaKnown RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 INTS9Q9NV88 658 aaKnown RBP15.88■□□□□ 0.13
SUMO1-208ENST00000409627 PCDHGA3Q9Y5H0 932 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 DCHS1Q96JQ0 3298 aa15.88■□□□□ 0.13
SUMO1-208ENST00000409627 KNTC1P50748 2209 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 FITM1A5D6W6 292 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 TXNDC9O14530 226 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 OR2B3O76000 313 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 CTSBP07858 339 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 STX3Q13277 289 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 RTP5Q14D33 572 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
SUMO1-208ENST00000409627 CPSF6Q16630 551 aaKnown RBP eCLIP15.87■□□□□ 0.13
SUMO1-208ENST00000409627 PRTGQ2VWP7 1150 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 ARL13AQ5H913 290 aaPredicted RBP15.87■□□□□ 0.13
SUMO1-208ENST00000409627 WASHC2DQ5SRD0 308 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 MANEAQ5SRI9 462 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 C10orf62Q5T681 223 aaPredicted RBP15.87■□□□□ 0.13
SUMO1-208ENST00000409627 DCAF12Q5T6F0 453 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 CES4AQ5XG92 561 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 TLDC1Q6P9B6 456 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 FOXR1Q6PIV2 292 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 CUZD1Q86UP6 607 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 GPR135Q8IZ08 494 aa15.87■□□□□ 0.13
SUMO1-208ENST00000409627 ZNF655Q8N720 491 aaPredicted RBP15.87■□□□□ 0.13
SUMO1-208ENST00000409627 CSNK1A1LQ8N752 337 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms