RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 ZNF740Q8NDX6 193 aa19.37■□□□□ 0.69
PTCD3-202ENST00000409326 MR1Q95460 341 aa19.37■□□□□ 0.69
PTCD3-202ENST00000409326 KIAA1143Q96AT1 154 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-202ENST00000409326 PHF21BQ96EK2 531 aa19.37■□□□□ 0.69
PTCD3-202ENST00000409326 WDR34Q96EX3 536 aa19.37■□□□□ 0.69
PTCD3-202ENST00000409326 AKIRIN1Q9H9L7 192 aaPredicted RBP19.37■□□□□ 0.69
PTCD3-202ENST00000409326 GEMIN8Q9NWZ8 242 aaKnown RBP19.37■□□□□ 0.69
PTCD3-202ENST00000409326 CROTQ9UKG9 612 aa19.37■□□□□ 0.69
PTCD3-202ENST00000409326 A0A1B0GX78 115 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 TERTO14746 1132 aaKnown RBP19.36■□□□□ 0.69
PTCD3-202ENST00000409326 DSCR3O14972 297 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 OR1F1O43749 312 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 PRAMEF4O60810 478 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 SIX3O95343 332 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-202ENST00000409326 EPB42P16452 691 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 CXCR2P25025 360 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 CRHR1P34998 444 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 CCT5P48643 541 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 SLC18A2Q05940 514 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 PCDH1Q08174 1060 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 E2F2Q14209 437 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 SLBPQ14493 270 aaKnown RBP eCLIP19.36■□□□□ 0.69
PTCD3-202ENST00000409326 KRT71Q3SY84 523 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 C1orf189Q5VU69 101 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 GARNL3Q5VVW2 1013 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 PRAMEF9Q5VWM5 478 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 TTLL10Q6ZVT0 673 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 ASPGQ86U10 573 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 C4orf33Q8N1A6 199 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 ARHGEF39Q8N4T4 335 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 CAMKVQ8NCB2 501 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 CT55Q8WUE5 264 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 HNRNPLLQ8WVV9 542 aaKnown RBP19.36■□□□□ 0.69
PTCD3-202ENST00000409326 TM4SF19Q96DZ7 209 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 C10orf90Q96M02 699 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 ZIM3Q96PE6 472 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 EFHD1Q9BUP0 239 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 NLNQ9BYT8 704 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 CHST8Q9H2A9 424 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 GPN2Q9H9Y4 310 aaPredicted RBP19.36■□□□□ 0.69
PTCD3-202ENST00000409326 COPG2Q9UBF2 871 aa19.36■□□□□ 0.69
PTCD3-202ENST00000409326 LRRC14BA6NHZ5 514 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 A8MT66 165 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 C21orf140B9A014 251 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 E2F3O00716 465 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 COPEO14579 308 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 H2AFYO75367 372 aaKnown RBP19.35■□□□□ 0.69
PTCD3-202ENST00000409326 MED26O95402 600 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 TCN2P20062 427 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 TAC1P20366 129 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 AGXTP21549 392 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 EEF1DP29692 281 aaKnown RBP19.35■□□□□ 0.69
PTCD3-202ENST00000409326 AHRP35869 848 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 DLSTP36957 453 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 PIK3CGP48736 1102 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 TMPRSS3P57727 454 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 NFKB2Q00653 900 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 TBCCQ15814 346 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 MUM1Q2TAK8 710 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 XKR6Q5GH73 641 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 LCN10Q6JVE6 187 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 FAM199XQ6PEV8 388 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-202ENST00000409326 TEX9Q8N6V9 391 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 PTCD3Q96EY7 689 aaKnown RBP19.35■□□□□ 0.69
PTCD3-202ENST00000409326 EFCAB11Q9BUY7 163 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 PITHD1Q9GZP4 211 aaPredicted RBP19.35■□□□□ 0.69
PTCD3-202ENST00000409326 MKS1Q9NXB0 559 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 ZFP69BQ9UJL9 534 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 EMCNQ9ULC0 261 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 ANGPTL3Q9Y5C1 460 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 DSPP15924 2871 aaKnown RBP19.35■□□□□ 0.69
PTCD3-202ENST00000409326 SCN3AQ9NY46 2000 aa19.35■□□□□ 0.69
PTCD3-202ENST00000409326 KATNA1O75449 491 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 STATHP02808 62 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 SLC35G6P0C7Q6 338 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 ALAS2P22557 587 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 CASP2P42575 452 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 DCDP81605 110 aaKnown RBP19.34■□□□□ 0.69
PTCD3-202ENST00000409326 IRF8Q02556 426 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 CHIT1Q13231 466 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 DNASE1L3Q13609 305 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 GTF2H2Q13888 395 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 COL9A2Q14055 689 aaPredicted RBP19.34■□□□□ 0.69
PTCD3-202ENST00000409326 DOC2AQ14183 400 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 GTF2H2CQ6P1K8 395 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 FAM198BQ6UWH4 519 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 GOLGA7Q7Z5G4 137 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 SRRM1Q8IYB3 904 aaKnown RBP19.34■□□□□ 0.69
PTCD3-202ENST00000409326 KRT78Q8N1N4 520 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 ANKRD53Q8N9V6 530 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 SLC13A3Q8WWT9 602 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 MVB12AQ96EY5 273 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 C17orf62Q9BQA9 187 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 FAM117AQ9C073 453 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 NT5DC2Q9H857 520 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 NDOR1Q9UHB4 597 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 KCND3Q9UK17 655 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 GRID1Q9ULK0 1009 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 PCDHGA6Q9Y5G7 932 aa19.34■□□□□ 0.69
PTCD3-202ENST00000409326 NDUFS4O43181 175 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms