RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LPCAT1Q8NF37 534 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 PDLIM5Q96HC4 596 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 C5orf66Q9H5L9 145 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 DBNDD1Q9H9R9 158 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 EPHA6Q9UF33 1036 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF580Q9UK33 172 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 STX8Q9UNK0 236 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 NCKAP1Q9Y2A7 1128 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 COLEC10Q9Y6Z7 277 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 WDR81Q562E7 1941 aa3.46□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRAV18A0A075B6X5 111 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 A0A0B4J203 849 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ILVBLA1L0T0 632 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ANTXRLA6NF34 631 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ANKDD1BA6NHY2 528 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 MLNRO43193 412 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 EXTL3O43909 919 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 KIF5CO60282 957 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 KRT36O76013 467 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 UMODP07911 640 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 PATE4P0C8F1 98 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ITGA3P26006 1051 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ATP6V1E1P36543 226 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 CETN2P41208 172 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 KRTAP10-11P60412 298 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 FKBP1BP68106 108 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 AKAP17AQ02040 695 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 TMEM132DQ14C87 1099 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 SGCBQ16585 318 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 XKR6Q5GH73 641 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 PLBD1Q6P4A8 553 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ALKBH5Q6P6C2 394 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 SLC24A5Q71RS6 500 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 PHLDB2Q86SQ0 1253 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ASPGQ86U10 573 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 CNTN4Q8IWV2 1026 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 RCOR2Q8IZ40 523 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 GBP7Q8N8V2 638 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 GPRC5AQ8NFJ5 357 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 OR1L3Q8NH93 324 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 SLC26A7Q8TE54 656 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 SNRNP40Q96DI7 357 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 NXPE2Q96DL1 559 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF486Q96H40 463 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 CDKN2AIPNLQ96HQ2 116 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 EPSTI1Q96J88 318 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 CCDC43Q96MW1 224 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 SPATA13Q96N96 652 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 TSSK2Q96PF2 358 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 BTBD9Q96Q07 612 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 EGLN3Q9H6Z9 239 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 RNPEPL1Q9HAU8 725 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 MID1IP1Q9NPA3 183 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 PPANQ9NQ55 473 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF71Q9NQZ8 489 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 MRPL17Q9NRX2 175 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 INTS10Q9NVR2 710 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 TRPC4Q9UBN4 977 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 C19orf25Q9UFG5 118 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 LEF1Q9UJU2 399 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 FBXW2Q9UKT8 454 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ICAM5Q9UMF0 924 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 PA2G4Q9UQ80 394 aaKnown RBP3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 TMED7Q9Y3B3 224 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 C2CD2Q9Y426 696 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 LRP12Q9Y561 859 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 ANGPTL3Q9Y5C1 460 aa3.46□□□□□ -1.86
HMGB1P17-201ENST00000403495 A0A0G2JLW4 131 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 C2CD4DB7Z1M9 353 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 DDX39AO00148 427 aaKnown RBP3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 PGRMC2O15173 223 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 EPHB6O15197 1021 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 VEGFDO43915 354 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 GLRA3O75311 464 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 CLPTM1O96005 669 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 MT-ND3P03897 115 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 EDN1P05305 212 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 PRSS56P0CW18 603 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 GP1BBP13224 206 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 EZRP15311 586 aaKnown RBP3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 VCLP18206 1134 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 GJB2P29033 226 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 SRD5A2P31213 254 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 MAGEA11P43364 429 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 CLDN17P56750 224 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 HNRNPDQ14103 355 aaKnown RBP3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 MORF4L2Q15014 288 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 ZNF74Q16587 644 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 KLHL10Q6JEL2 608 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 G2E3Q7L622 706 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 PTAR1Q7Z6K3 402 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 LACC1Q8IV20 430 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 SERPINA12Q8IW75 414 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 KLHDC8AQ8IYD2 350 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 CLEC1AQ8NC01 280 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 APOBEC4Q8WW27 367 aaKnown RBP3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 SUSD6Q92537 303 aa3.45□□□□□ -1.86
HMGB1P17-201ENST00000403495 BCL2L2Q92843 193 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms