RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 TRIM69Q86WT6 500 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 FBXO11Q86XK2 927 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 MRPL41Q8IXM3 137 aaKnown RBP5.48□□□□□ -1.53
CNGA1-202ENST00000402813 TCP10LQ8TDR4 215 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 SLCO2A1Q92959 643 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 UBE2FQ969M7 185 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 CSPG4P5Q96PW8 444 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 RTP3Q9BQQ7 232 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 TMEM246Q9BRR3 403 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 GOLPH3LQ9H4A5 285 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 DPEP3Q9H4B8 488 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 NSUN3Q9H649 340 aaKnown RBP5.48□□□□□ -1.53
CNGA1-202ENST00000402813 LHX6Q9UPM6 363 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 SLC5A6Q9Y289 635 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 XDHP47989 1333 aa5.48□□□□□ -1.53
CNGA1-202ENST00000402813 ARAP2Q8WZ64 1704 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 SCN11AQ9UI33 1791 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 A0A0A6YYK5 440 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TCRBV5S4A2TA0A5A2 114 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TUBAL3A6NHL2 446 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 FAM90A8PA6NJQ4 464 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ABCD4O14678 606 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 EIF3HO15372 352 aaKnown RBP eCLIP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 NOS1APO75052 506 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ATG13O75143 517 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 FCER2P06734 321 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 FAM90A13PP0C7W8 464 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 FAM90A24PP0C7X0 464 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 KRT15P19012 456 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MSH3P20585 1137 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PRDX5P30044 214 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 CXCR5P32302 372 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 CSF2RBP32927 897 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 DLSTP36957 453 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 EIF2S3P41091 472 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MMP13P45452 471 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PTDSS1P48651 473 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PRKAG1P54619 331 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MRPS25P82663 173 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 SHC2P98077 582 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 GALK2Q01415 458 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 FCHO2Q0JRZ9 810 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TARDBPQ13148 414 aaKnown RBP eCLIP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 NFYCQ13952 458 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 SLC18A3Q16572 532 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 C5orf64Q2M2E5 130 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 C18orf21Q32NC0 220 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TMEM214Q6NUQ4 689 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 RD3Q7Z3Z2 195 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TSPAN14Q8NG11 270 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 OR4A15Q8NGL6 344 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MYDGFQ969H8 173 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ESAMQ96AP7 390 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ULK4Q96C45 1275 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 RRNAD1Q96FB5 475 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 NAT9Q9BTE0 207 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 WNT10AQ9GZT5 417 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MMP27Q9H306 513 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 RANBP3Q9H6Z4 567 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 VIPAS39Q9H9C1 493 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 FSCN3Q9NQT6 498 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TXLNGQ9NUQ3 528 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MTCH1Q9NZJ7 389 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 HEY2Q9UBP5 337 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PCDHA12Q9UN75 941 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PKP3Q9Y446 797 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ALS2Q96Q42 1657 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TMEM238C9JI98 176 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 F8VP50 259 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 GNB5O14775 395 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PRSS23O95084 383 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 BRI3O95415 125 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TRIM49P0CI25 452 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TRIM49CP0CI26 452 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ELNP15502 786 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 EEF1B2P24534 225 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TEAD1P28347 426 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 OR1E1P30953 314 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PTPN7P35236 360 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 VIPR2P41587 438 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 RAD23BP54727 409 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PTENP60484 403 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 SIM1P81133 766 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 HSF2Q03933 536 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 CHRNEQ04844 493 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 MADCAM1Q13477 382 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 NECTIN1Q15223 517 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PSG3Q16557 428 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 CDO1Q16878 200 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 ALKBH6Q3KRA9 238 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 DPCR1Q3MIW9 517 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 UBAP2Q5T6F2 1119 aaKnown RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 METTL7BQ6UX53 244 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 LIPIQ6XZB0 460 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TMEM182Q6ZP80 229 aaPredicted RBP5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TRPM8Q7Z2W7 1104 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 TMC8Q8IU68 726 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 METTL25Q8N6Q8 603 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 PQLC3Q8N755 202 aa5.47□□□□□ -1.53
CNGA1-202ENST00000402813 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms