RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 KLHL17Q6TDP4 642 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 RSPO2Q6UXX9 243 aaPredicted RBP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 CCDC190Q86UF4 302 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 CFAP52Q8N1V2 620 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 TMEM132CQ8N3T6 1108 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 BHMTQ93088 406 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 MYEOVQ96EZ4 313 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 CDKN2AIPNLQ96HQ2 116 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 DIRAS2Q96HU8 199 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 MGLLQ99685 303 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 ACOXLQ9NUZ1 547 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 MS4A12Q9NXJ0 267 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 NPAP1Q9NZP6 1156 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 PCDHGA6Q9Y5G7 932 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 MYO7AQ13402 2215 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 C5orf42Q9H799 3197 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 TNFRSF10BO14763 440 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 ZNF235Q14590 738 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 DUSP7Q16829 419 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 CDH24Q86UP0 819 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 MTERF3Q96E29 417 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 CCM2Q9BSQ5 444 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 C11orf54Q9H0W9 315 aaPredicted RBP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 STARD7Q9NQZ5 370 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 HEBP1Q9NRV9 189 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 AFF4Q9UHB7 1163 aaKnown RBP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 SAMD4AQ9UPU9 718 aaKnown RBP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 SNTNA6NMZ2 147 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 POLR1CO15160 346 aaPredicted RBP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 OPN1SWP03999 348 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 TSPAN19P0C672 248 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 FAPQ12884 760 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 C10orf62Q5T681 223 aaPredicted RBP16.53■□□□□ 0.24
PTPRA-205ENST00000399903 SUSD1Q6UWL2 747 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 OR8H3Q8N146 312 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 PHF21AQ96BD5 680 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 SCLYQ96I15 445 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 ABCC13Q9NSE7 274 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 NEU3Q9UQ49 428 aa16.53■□□□□ 0.24
PTPRA-205ENST00000399903 CLCA1A8K7I4 914 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 RFXANKO14593 260 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 RETP07949 1114 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 RPS19P39019 145 aaKnown RBP16.52■□□□□ 0.24
PTPRA-205ENST00000399903 TM4SF4P48230 202 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 IRF5Q13568 498 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 PLET1Q6UQ28 207 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 TMCO2Q7Z6W1 182 aaPredicted RBP16.52■□□□□ 0.24
PTPRA-205ENST00000399903 SLC22A4Q9H015 551 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 ATP13A2Q9NQ11 1180 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 GPRC5BQ9NZH0 403 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 SLC6A14Q9UN76 642 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 A8MX80 341 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 CDK1P06493 297 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 PRSS55Q6UWB4 352 aaPredicted RBP16.52■□□□□ 0.24
PTPRA-205ENST00000399903 TAS1R1Q7RTX1 841 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 PCSK9Q8NBP7 692 aaKnown RBP16.52■□□□□ 0.24
PTPRA-205ENST00000399903 FBLIM1Q8WUP2 373 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 GTPBP3Q969Y2 492 aaKnown RBP16.52■□□□□ 0.24
PTPRA-205ENST00000399903 MSANTD3Q96H12 275 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 PPP3R2Q96LZ3 170 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 FEVQ99581 238 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 PSORS1C1Q9UIG5 152 aa16.52■□□□□ 0.24
PTPRA-205ENST00000399903 MROH6A6NGR9 719 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 BTN3A3O00478 584 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 RGS14O43566 566 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 ULK1O75385 1050 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 GLUD1P00367 558 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 SLC9A3P48764 834 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 C10orf120Q5SQS8 335 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 SMYD5Q6GMV2 418 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 SLC24A5Q71RS6 500 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 LSMEM1Q8N8F7 131 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 FLCNQ8NFG4 579 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 PGAP3Q96FM1 320 aaPredicted RBP16.52■□□□□ 0.23
PTPRA-205ENST00000399903 CCDC32Q9BV29 185 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 IL1RAPQ9NPH3 570 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 CCDC59Q9P031 241 aaKnown RBP16.52■□□□□ 0.23
PTPRA-205ENST00000399903 POLHQ9Y253 713 aa16.52■□□□□ 0.23
PTPRA-205ENST00000399903 TDRD15B5MCY1 1934 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 RANBP2P49792 3224 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 MN1Q10571 1320 aaPredicted RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 CSTF3Q12996 717 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 DUSP4Q13115 394 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 TBCEQ15813 527 aaPredicted RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 OR4F3Q6IEY1 312 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 ABI3BPQ7Z7G0 1075 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 DNAJC22Q8N4W6 341 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 ASB15Q8WXK1 588 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 RNF170Q96K19 258 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 RIPOR3Q96MK2 946 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 IL4I1Q96RQ9 567 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 ACAT2Q9BWD1 397 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 LRTM1Q9HBL6 345 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 OLA1Q9NTK5 396 aaKnown RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 FABP12A6NFH5 140 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 AP2A2O94973 939 aa16.51■□□□□ 0.23
PTPRA-205ENST00000399903 POU3F3P20264 500 aaPredicted RBP16.51■□□□□ 0.23
PTPRA-205ENST00000399903 GNPDA1P46926 289 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms