RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 AKAP14Q86UN6 197 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 OR10Q1Q8NGQ4 319 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 SGCDQ92629 289 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 EZH1Q92800 747 aaPredicted RBP13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 MGME1Q9BQP7 344 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 PAPPAQ13219 1627 aa13.84□□□□□ -0.19
PCDHA11-201ENST00000398640 TULP2O00295 520 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 KMOO15229 486 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 SDC3O75056 442 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 SIX3O95343 332 aaPredicted RBP13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 GRIA1P42261 906 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 RASGEF1BQ0VAM2 473 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 E2F2Q14209 437 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 OGFOD2Q6N063 350 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 ERN2Q76MJ5 926 aaKnown RBP13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 PIM3Q86V86 326 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 SAMD14Q8IZD0 417 aaPredicted RBP13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 MUC13Q9H3R2 512 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 ZNF358Q9NW07 568 aa13.83□□□□□ -0.19
PCDHA11-201ENST00000398640 CDC40O60508 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 SERPINA3P01011 423 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 OPN1SWP03999 348 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 PGAM2P15259 253 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 SNTA1Q13424 505 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 NOXRED1Q6NXP6 359 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 RC3H2Q9HBD1 1191 aaKnown RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 RBMX2Q9Y388 322 aaKnown RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 PTGESO14684 152 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 NPHS1O60500 1241 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 GATBO75879 557 aaKnown RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 JUNP05412 331 aaKnown RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 S100A9P06702 114 aaKnown RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 JUPP14923 745 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 FMO3P31513 532 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 FCHO2Q0JRZ9 810 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 EIF4HQ15056 248 aaKnown RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 DGLUCYQ7Z3D6 616 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 LRRC57Q8N9N7 239 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 C7orf57Q8NEG2 295 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 ZFP3Q96NJ6 502 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 FAM83CQ9BQN1 747 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 UTS2RQ9UKP6 389 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 SH3D21A4FU49 640 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 MPZL2O60487 215 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 GBAP04062 536 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 COL21A1Q96P44 957 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 WDR77Q9BQA1 342 aaPredicted RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 LGR4Q9BXB1 951 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 ECI2O75521 394 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 PAK4O96013 591 aaPredicted RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 CREB1P16220 341 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 PTNP21246 168 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF41P51814 821 aaPredicted RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 MLLT6P55198 1093 aaPredicted RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 FITM2Q8N6M3 262 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF615Q8N8J6 731 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 MYLIPQ8WY64 445 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 TFGQ92734 400 aaPredicted RBP13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 FZD3Q9NPG1 666 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 TMEM248Q9NWD8 314 aa13.83□□□□□ -0.2
PCDHA11-201ENST00000398640 MEIS3P2A8K0S8 358 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 GABRDO14764 452 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 AIREO43918 545 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 RPP14O95059 124 aaKnown RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 SNX4O95219 450 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 LMAN2Q12907 356 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 FAM26DQ5JW98 314 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF648Q5T619 568 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 NCBP2-AS2Q69YL0 99 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 ZNF783Q6ZMS7 281 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 UFD1Q92890 307 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MMABQ96EY8 250 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 LRRC46Q96FV0 321 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MAN2B2Q9Y2E5 1009 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 COMMD3-BMI1R4GMX3 469 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MYOCOSA0A1B0GUC4 107 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 ITM2AO43736 263 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 RNGTTO60942 597 aaKnown RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 UNGP13051 313 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 CXCL12P48061 93 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 SYVN1Q86TM6 617 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 RAB7BQ96AH8 199 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 KCNC2Q96PR1 638 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 TUBGCP5Q96RT8 1024 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 TTYH3Q9C0H2 523 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 FARSBQ9NSD9 589 aaKnown RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 VPS29Q9UBQ0 182 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 FZD4Q9ULV1 537 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 NPIPA5E9PKD4 350 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 LATS1O95835 1130 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 BCHEP06276 602 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 VSX2P58304 361 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 ADGRE1Q14246 886 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 SUSD1Q6UWL2 747 aa13.82□□□□□ -0.2
PCDHA11-201ENST00000398640 SPATC1Q76KD6 591 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms