RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PUM1Q14671 1186 aaKnown RBP eCLIP11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 ODF4Q2M2E3 257 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 CEACAM20Q6UY09 585 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 SATL1Q86VE3 508 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 WDTC1Q8N5D0 677 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 LRRC17Q8N6Y2 441 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 ZSWIM3Q96MP5 696 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 TXLNGYQ9BZA5 131 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 POLR2J2Q9GZM3 115 aaKnown RBP11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 USP29Q9HBJ7 922 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 MOCS1Q9NZB8 636 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 FLRT1Q9NZU1 646 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 CYTH4Q9UIA0 394 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 TSPAN6O43657 245 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 AIREO43918 545 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CDH1P12830 882 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 HOXA11P31270 313 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CSTF2P33240 577 aaKnown RBP eCLIP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 TSPAN5P62079 268 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ABATP80404 500 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CHAF1BQ13112 559 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CCINQ13939 588 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ZNF311Q5JNZ3 666 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 SAMD14Q8IZD0 417 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GPATCH1Q9BRR8 931 aaKnown RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GPR174Q9BXC1 333 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GSDMCQ9BYG8 508 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 SBF2Q86WG5 1849 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 HEPACAM2A8MVW5 462 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 PLK4O00444 970 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 TLX3O43711 291 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 RPP14O95059 124 aaKnown RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 HOXC12P31275 282 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 EIF1AXP47813 144 aaKnown RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CLCN4P51793 760 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CAMKVQ8NCB2 501 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 RASSF5Q8WWW0 418 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ROPN1LQ96C74 230 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GFM1Q96RP9 751 aaKnown RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GPR22Q99680 433 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 UBAP1Q9NZ09 502 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 PDE10AQ9Y233 779 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 SVILO95425 2214 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CABIN1Q9Y6J0 2220 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ZNF840PA6NDX5 716 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 NDUFS1P28331 727 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 HNF1BP35680 557 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ZNF267Q14586 743 aaPredicted RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 TMEM25Q86YD3 366 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GATSQ8NAP1 163 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 PHOSPHO1Q8TCT1 267 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 P2RY13Q9BPV8 354 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 RHCGQ9UBD6 479 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 STYXL1Q9Y6J8 313 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 DUXAA6NLW8 204 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CPNE3O75131 537 aaKnown RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 PGRP06401 933 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CA3P07451 260 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 ACADLP28330 430 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 SLC6A9P48067 706 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 DSTNP60981 165 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 DPYSQ14117 519 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 EOGTQ5NDL2 527 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 GOLGA7Q7Z5G4 137 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 OR5T3Q8NGG3 340 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 NSUN5Q96P11 429 aaKnown RBP11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 DGAT2Q96PD7 388 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 SNTG1Q9NSN8 517 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 COMMD3Q9UBI1 195 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 CDC14AQ9UNH5 594 aa11.2□□□□□ -0.62
PCDHGA8-201ENST00000398604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 TRBC2A0A5B9 178 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 DAPL1A0PJW8 107 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 KAT7O95251 611 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 SOX14O95416 240 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 CXCR1P25024 350 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 PTX3P26022 381 aaPredicted RBP11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 IVDP26440 423 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 ARFIP1P53367 373 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 C5orf22Q49AR2 442 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 CRTC1Q6UUV9 634 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 CCDC116Q8IYX3 515 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 LGI4Q8N135 537 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 OR10G2Q8NGC3 310 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 HM13Q8TCT9 377 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 CMTM7Q96FZ5 175 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 SHDQ96IW2 340 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 KCNC2Q96PR1 638 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 RAB11FIP5Q9BXF6 653 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 TPT1P8Q9HAU6 139 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 SPATA7Q9P0W8 599 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 ABI3Q9P2A4 366 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 SNX7Q9UNH6 387 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 TAF1LQ8IZX4 1826 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 A0A1W2PQU0 124 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 TTC34A8MYJ7 566 aa11.19□□□□□ -0.62
PCDHGA8-201ENST00000398604 PTGESO14684 152 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms