RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 EXT1Q16394 746 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 IQCCQ4KMZ1 466 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 AARDQ4LEZ3 155 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 SLC39A12Q504Y0 691 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 SLC25A53Q5H9E4 307 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 BSPRYQ5W0U4 402 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 FUT10Q6P4F1 479 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PODNL1Q6PEZ8 512 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 ZNF790Q6PG37 636 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PSRC1Q6PGN9 363 aaPredicted RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 LEKR1Q6ZMV7 388 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 SLC16A9Q7RTY1 509 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PRUNE1Q86TP1 453 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 APLFQ8IW19 511 aaPredicted RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 KLHDC8AQ8IYD2 350 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PRSS35Q8N3Z0 413 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 FAM89BQ8N5H3 189 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 OR1L3Q8NH93 324 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 SAP25Q8TEE9 199 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 TMEM190Q8WZ59 177 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 GIMAP5Q96F15 307 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 ZNF354BQ96LW1 612 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 C10orf90Q96M02 699 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PGLYRP2Q96PD5 576 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 ATP6V0BQ99437 205 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PRMT1Q99873 361 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 BICC1Q9H694 974 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 MID1IP1Q9NPA3 183 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 INTS9Q9NV88 658 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 IL36AQ9UHA7 158 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 NOCTQ9UK39 431 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 AGTPBP1Q9UPW5 1226 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 TCF19Q9Y242 345 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 KNSTRNQ9Y448 316 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 HBS1LQ9Y450 684 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 DISP3Q9P2K9 1392 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 C13orf42A0A1B0GVH6 325 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 MTMR11A4FU01 709 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FAM149AA5PLN7 773 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 SLCO1B7G3V0H7 640 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FAM72CH0Y354 149 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 H0YIG0 161 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CCL24O00175 119 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CTDSPLO15194 276 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 NME6O75414 186 aaPredicted RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 RAD51DO75771 328 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 AKAP3O75969 853 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 OLFM2O95897 454 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PNPP00491 289 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 NGFP01138 241 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PRSS1P07477 247 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PRSS56P0CW18 603 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 UROSP10746 265 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CYP2A7P20853 494 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ELAVL4P26378 380 aaKnown RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 PIK3R1P27986 724 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 MAGEA11P43364 429 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 OR3A3P47888 321 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 OR1D5P58170 312 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 MYL7Q01449 175 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ACTN3Q08043 901 aaPredicted RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 OPCMLQ14982 345 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 SGCBQ16585 318 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CCDC158Q5M9N0 1113 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FAM72AQ5TYM5 149 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 AGAP6Q5VW22 663 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FAM46CQ5VWP2 391 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FAM72DQ6L9T8 149 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 SLC25A47Q6Q0C1 308 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CEACAM20Q6UY09 585 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 KCTD9Q7L273 389 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PIGWQ7Z7B1 504 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FAM72BQ86X60 149 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CDK20Q8IZL9 346 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 LSMEM2Q8N112 164 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 KLHDC1Q8N7A1 406 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 TMEM99Q8N816 258 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 OR13C3Q8NGS6 347 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 OR2T11Q8NH01 316 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 GATAD1Q8WUU5 269 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 UBE2Q2Q8WVN8 375 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ZNRF4Q8WWF5 429 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 WBP2Q969T9 261 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 RBM41Q96IZ5 413 aaKnown RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 CABS1Q96KC9 395 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 CCDC43Q96MW1 224 aaKnown RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 C17orf62Q9BQA9 187 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PIGQQ9BRB3 760 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PI4K2AQ9BTU6 479 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ZDHHC6Q9H6R6 413 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ATP13A3Q9H7F0 1226 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ZNF71Q9NQZ8 489 aaPredicted RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 TMEM161AQ9NX61 479 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 SPG21Q9NZD8 308 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 FBXL4Q9UKA2 621 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 PRDM4Q9UKN5 801 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 ELF5Q9UKW6 265 aaPredicted RBP2.43□□□□□ -2.02
CD47-203ENST00000398258 SNX5Q9Y5X3 404 aa2.43□□□□□ -2.02
CD47-203ENST00000398258 A0A087X0K7 114 aa2.42□□□□□ -2.02
CD47-203ENST00000398258 ANTXRLA6NF34 631 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms