RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TMBIM1Q969X1 311 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TSSK3Q96PN8 268 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MGME1Q9BQP7 344 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 UCK2Q9BZX2 261 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ACTL8Q9H568 366 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ERVMER34-1Q9H9K5 563 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 RANGRFQ9HD47 186 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 PRDM8Q9NQV8 689 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 AIG1Q9NVV5 245 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FAM118AQ9NWS6 357 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MARCH5Q9NX47 278 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 COQ3Q9NZJ6 369 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 INTS6Q9UL03 887 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 CLEC4EQ9ULY5 219 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CHD5Q8TDI0 1954 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CCDC163A0A0D9SF12 145 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MEIOCA2RUB1 952 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 OR7A17O14581 309 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 AP3D1O14617 1153 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ALPLP05186 524 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 HOXB1P14653 301 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 OGNP20774 298 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 AGXTP21549 392 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FSHRP23945 695 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 UGT2B10P36537 528 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 HNF4AP41235 474 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TTPAP49638 278 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ERVK-8P63133 956 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FAM189BP81408 668 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SMAD3P84022 425 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 CD47Q08722 323 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FAPQ12884 760 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FADDQ13158 208 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 GPR17Q13304 367 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TSTA3Q13630 321 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 CDH18Q13634 790 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 DDX39BQ13838 428 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 BCL7AQ4VC05 210 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 HECTD3Q5T447 861 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SYT6Q5T7P8 510 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 GARNL3Q5VVW2 1013 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ANKS3Q6ZW76 656 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NKAPQ8N5F7 415 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ARL14EPQ8N8R7 260 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ULK4Q96C45 1275 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 FEM1AQ9BSK4 669 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CCDC32Q9BV29 185 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ADGRE3Q9BY15 652 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 IFT22Q9H7X7 185 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SLC52A3Q9NQ40 469 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ENAMQ9NRM1 1142 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 OLA1Q9NTK5 396 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ELOVL2Q9NXB9 296 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 WWOXQ9NZC7 414 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ADGRE2Q9UHX3 823 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MBD1Q9UIS9 605 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 LEF1Q9UJU2 399 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ZNF490Q9ULM2 529 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 SNX7Q9UNH6 387 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SNX6Q9UNH7 406 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NOSIPQ9Y314 301 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 TPRKBQ9Y3C4 175 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 PEX16Q9Y5Y5 336 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 WDFY3Q8IZQ1 3526 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ZNF840PA6NDX5 716 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 OR6C70A6NIJ9 312 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CLDN24A6NM45 220 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 H0YC42 278 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 I3L521 148 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 TOR1AO14656 332 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NDUFA2O43678 99 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 KDELR3O43731 214 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 SSX4O60224 188 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 HS6ST1O60243 411 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 AOC2O75106 756 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MLYCDO95822 493 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 EOMESO95936 686 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CD160O95971 181 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CST1P01037 141 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CYP2A6P11509 494 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 CD36P16671 472 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 PIGAP37287 484 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CSKP41240 450 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 GNPDA1P46926 289 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MAPKAPK2P49137 400 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 STK19P49842 368 aaPredicted RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ATP4BP51164 291 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CDH4P55283 916 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MVKQ03426 396 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ACVR1Q04771 509 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CLCA4Q14CN2 919 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NKG7Q16617 165 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 MAPKAPK3Q16644 382 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 LRRC26Q2I0M4 334 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 CTU2Q2VPK5 515 aaKnown RBP4.87□□□□□ -1.63
SSR1-202ENST00000397511 ARMC4Q5T2S8 1044 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ARSKQ6UWY0 536 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 NRARPQ7Z6K4 114 aa4.87□□□□□ -1.63
SSR1-202ENST00000397511 ZDHHC13Q8IUH4 622 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms