RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 PPCSQ9HAB8 311 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 ZNF304Q9HCX3 659 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 ENAMQ9NRM1 1142 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 ZNF358Q9NW07 568 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 GPRC5BQ9NZH0 403 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 ANGPTL3Q9Y5C1 460 aa24.19■■□□□ 1.46
TSPAN4-207ENST00000397411 KMT2BQ9UMN6 2715 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 CDC14CA4D256 554 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 MAP2K7O14733 419 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 SLCO1A2P46721 670 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 OR1D4P47884 311 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 PDK4Q16654 411 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 PFKFB4Q16877 469 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 PRMT9Q6P2P2 845 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 SYVN1Q86TM6 617 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 CATSPER2Q96P56 530 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 GPR78Q96P69 363 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 YIPF2Q9BWQ6 316 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 OPTCQ9UBM4 332 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 MAU2Q9Y6X3 613 aa24.18■■□□□ 1.46
TSPAN4-207ENST00000397411 SMIM24O75264 130 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 RFPL1O75677 317 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 SLC35G6P0C7Q6 338 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 VARSP26640 1264 aaKnown RBP24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 GCGRP47871 477 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 CDC20Q12834 499 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 FAM198BQ6UWH4 519 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 LRRC70Q7Z2Q7 622 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 KRT78Q8N1N4 520 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 ARHGAP9Q9BRR9 750 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 SYNPO2LQ9H987 977 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 TCFL5Q9UL49 500 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 CELSR3Q9NYQ7 3312 aa24.17■■□□□ 1.46
TSPAN4-207ENST00000397411 TLDC2A0PJX2 215 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 P2RX6O15547 441 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 PRPF4O43172 522 aaKnown RBP eCLIP24.16■■□□□ 1.469e-7■■■■□ 19.8
TSPAN4-207ENST00000397411 KRT15P19012 456 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 AGTR2P50052 363 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 IFFO1Q0D2I5 559 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 XKR6Q5GH73 641 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 TECRLQ5HYJ1 363 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 SLCO4C1Q6ZQN7 724 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 ZNF740Q8NDX6 193 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 AENQ8WTP8 325 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 C10orf90Q96M02 699 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 MACROD1Q9BQ69 325 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 TMCO1Q9UM00 188 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 PTRH2Q9Y3E5 179 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 CCDC88CQ9P219 2028 aa24.16■■□□□ 1.46
TSPAN4-207ENST00000397411 DSPP15924 2871 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 GOLGA8RI6L899 631 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 K7EPI3 171 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 RECKO95980 971 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 CAPN1P07384 714 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 TUBBP07437 444 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 FBLP22087 321 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 FOLR3P41439 243 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 AVPR1BP47901 424 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 ALDH18A1P54886 795 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 NFKB2Q00653 900 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 REEP5Q00765 189 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 RGS1Q08116 209 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 HIST2H2ACQ16777 129 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 DEFB109BQ30KR1 87 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 CRTC2Q53ET0 693 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 ATP1A1-AS1Q5TC04 95 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 ATG9BQ674R7 924 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 HIST2H2AA3Q6FI13 130 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 OVCH1Q7RTY7 1134 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 VN1R4Q7Z5H5 301 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 ACMSDQ8TDX5 336 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 MMABQ96EY8 250 aaPredicted RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 MRPL57Q9BQC6 102 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 DRC3Q9H069 523 aa24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 TNPO3Q9Y5L0 923 aaKnown RBP24.15■■□□□ 1.46
TSPAN4-207ENST00000397411 FER1L5A0AVI2 2057 aa24.14■■□□□ 1.46
TSPAN4-207ENST00000397411 NDUFS4O43181 175 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 MED26O95402 600 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 MTHFD2P13995 350 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 EPB42P16452 691 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 AHRP35869 848 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 SCTRP47872 440 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 IRF8Q02556 426 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 OCA2Q04671 838 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 SLBPQ14493 270 aaKnown RBP eCLIP24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 SETDB1Q15047 1291 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 DTWD1Q8N5C7 304 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 TEX9Q8N6V9 391 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 TRPV3Q8NET8 790 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 UBTD2Q8WUN7 234 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 TM4SF19Q96DZ7 209 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 MVB12AQ96EY5 273 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 SARGQ9BW04 601 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 SPNS1Q9H2V7 528 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 MRPL46Q9H2W6 279 aaKnown RBP24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 XPR1Q9UBH6 696 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 ZFP69BQ9UJL9 534 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 POLHQ9Y253 713 aa24.14■■□□□ 1.45
TSPAN4-207ENST00000397411 A0A0A6YYC8 382 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms