RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 GPR3P46089 330 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 ZNF33BQ06732 778 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 NR0B2Q15466 257 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 LSM12Q3MHD2 195 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 KLHL35Q6PF15 583 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 DHRS13Q6UX07 377 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 Q6ZSR9 355 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 TRIM46Q7Z4K8 759 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 TRIM73Q86UV7 250 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 OR7G3Q8NG95 312 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 OR6C4Q8NGE1 309 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 OR2T11Q8NH01 316 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 ACTRT2Q8TDY3 377 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 SELENOMQ8WWX9 145 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 HBEGFQ99075 208 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 AIF1LQ9BQI0 150 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 CCDC28BQ9BUN5 200 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 PITHD1Q9GZP4 211 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 NT5DC2Q9H857 520 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 TCF7L2Q9NQB0 619 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 EVA1BQ9NVM1 165 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 POMT2Q9UKY4 750 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 TSC22D4Q9Y3Q8 395 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 KLK4Q9Y5K2 254 aa16.25■□□□□ 0.19
TSPAN4-205ENST00000397406 ASXL3Q9C0F0 2248 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 IGHV1OR21-1A0A087WYE8 117 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 TMEM8BA6NDV4 472 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 NRP2O60462 931 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 PRR35P0CG20 571 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 PNLIPP16233 465 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 CXCR2P25025 360 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 LSSP48449 732 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 ACADVLP49748 655 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 NEK2P51955 445 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 IFT88Q13099 833 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 HIST2H2ACQ16777 129 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 PROX2Q3B8N5 592 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 SGO1Q5FBB7 561 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 HIST2H2AA3Q6FI13 130 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 ADNP2Q6IQ32 1131 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 ARMC6Q6NXE6 501 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 TMIGD1Q6UXZ0 262 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 ACAD11Q709F0 780 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 LARP4Q71RC2 724 aaKnown RBP eCLIP16.24■□□□□ 0.198e-7■■■■■ 32.5
TSPAN4-205ENST00000397406 PAQR7Q86WK9 346 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 KRT78Q8N1N4 520 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 UBE2E3Q969T4 207 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 REPS1Q96D71 796 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 MTFMTQ96DP5 389 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 CNDP2Q96KP4 475 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 RILPQ96NA2 401 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 PLCD4Q9BRC7 762 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 RAB33BQ9H082 229 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 ABCG4Q9H172 646 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 PFDN4Q9NQP4 134 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 HEY2Q9UBP5 337 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 FTSJ1Q9UET6 329 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 KLHL20Q9Y2M5 609 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 PTPRBP23467 1997 aa16.24■□□□□ 0.19
TSPAN4-205ENST00000397406 A0A0J9YY10 115 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 FEZF1A0PJY2 475 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 OR2A25A4D2G3 310 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 B4GAT1O43505 415 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 OR1D5P58170 312 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 CCDC157Q569K6 752 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 C10orf62Q5T681 223 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 GUSBP11Q6P575 273 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 RNF175Q8N4F7 328 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 ANKRD53Q8N9V6 530 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 CEP70Q8NHQ1 597 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 HUS1BQ8NHY5 278 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 CCT6BQ92526 530 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 CCDC74AQ96AQ1 378 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 PPM1MQ96MI6 270 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 SARGQ9BW04 601 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 ACPTQ9BZG2 426 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 EPB41L1Q9H4G0 881 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 AKTIPQ9H8T0 292 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 ANKMY1Q9P2S6 941 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 GIMAP2Q9UG22 337 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 SNX7Q9UNH6 387 aa16.23■□□□□ 0.19
TSPAN4-205ENST00000397406 CHD6Q8TD26 2715 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 TRBC2A0A5B9 178 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 EME2A4GXA9 379 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 SLC28A1O00337 649 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 HAT1O14929 419 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 LCMT2O60294 686 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 VPS4BO75351 444 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 LDOC1O95751 146 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 PCNAP12004 261 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 MAGP20916 626 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 ALDH4A1P30038 563 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 CSTF3Q12996 717 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 FCRL6Q6DN72 434 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 FIGLAQ6QHK4 219 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 VN1R5Q7Z5H4 357 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 ADCK2Q7Z695 626 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 SPRED1Q7Z699 444 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 PROSER1Q86XN7 944 aa16.22■□□□□ 0.19
TSPAN4-205ENST00000397406 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■■■■■ 92.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms