RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 TNFRSF12AQ9NP84 129 aa22.59■■□□□ 1.21
TSPAN4-203ENST00000397397 PLCL2Q9UPR0 1127 aa22.59■■□□□ 1.21
TSPAN4-203ENST00000397397 MDC1Q14676 2089 aaKnown RBP22.59■■□□□ 1.21
TSPAN4-203ENST00000397397 EFCAB7A8K855 629 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 HCRTR1O43613 425 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 SNUPNO95149 360 aaKnown RBP22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 PCNAP12004 261 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 HMOX2P30519 316 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 GPR19Q15760 415 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 LAS2Q8IYD9 372 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 AGR3Q8TD06 166 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 REPS1Q96D71 796 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 THAP11Q96EK4 314 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 SORT1Q99523 831 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 CMKLR1Q99788 373 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 SLC29A3Q9BZD2 475 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 TIMM22Q9Y584 194 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 PCDHGA4Q9Y5G9 962 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 PCDHGA11Q9Y5H2 935 aa22.58■■□□□ 1.21
TSPAN4-203ENST00000397397 H0YIV9 168 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 AZIN1O14977 448 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 POLR3GO15318 223 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 GABRA4P48169 554 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 FOXA1P55317 472 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ACY1Q03154 408 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 SH2D4BQ5SQS7 431 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 FRMPD2BQ6IN97 320 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.57■■□□□ 1.21e-6■■■■■ 92.8
TSPAN4-203ENST00000397397 CACTIN-AS1Q8N1I8 211 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ANKRD53Q8N9V6 530 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 OR7G3Q8NG95 312 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 RERGQ96A58 199 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 LIN37Q96GY3 246 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 OR2A5Q96R48 311 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ILKAPQ9H0C8 392 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 SYNPO2LQ9H987 977 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 OCIAD1Q9NX40 245 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ZDHHC2Q9UIJ5 367 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 SNX6Q9UNH7 406 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 FIS1Q9Y3D6 152 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 RAP2CQ9Y3L5 183 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 CNOT1A5YKK6 2376 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 SPTBN2O15020 2390 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 LOC105369274A0A096LPK9 316 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 LOC102723532A0A0G2JNH3 316 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ANKDD1BA6NHY2 528 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 H0YGG7 62 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 UROSP10746 265 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 AHRP35869 848 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 GYS2P54840 703 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 VSX2P58304 361 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ARF3P61204 181 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 CYP4F2P78329 520 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 FOXM1Q08050 763 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 IFT88Q13099 833 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 TARDBPQ13148 414 aaKnown RBP eCLIP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 CLEC6AQ6EIG7 209 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 OR4N4Q8N0Y3 316 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 GALNT15Q8N3T1 639 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ZNF781Q8N8C0 355 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 TTLQ8NG68 377 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 MTFMTQ96DP5 389 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ELOVL6Q9H5J4 265 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 FANCEQ9HB96 536 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 FGF21Q9NSA1 209 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 SIDT1Q9NXL6 827 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 ZFP69BQ9UJL9 534 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 LOXL2Q9Y4K0 774 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 TRAF6Q9Y4K3 522 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 AP1M2Q9Y6Q5 423 aa22.57■■□□□ 1.2
TSPAN4-203ENST00000397397 CCDC187A0A096LP49 1063 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 FAM149AA5PLN7 773 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 TMEM150CB9EJG8 249 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 KRT6AP02538 564 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 STATHP02808 62 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 KRT6BP04259 564 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 EIF2S1P05198 315 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 SERPIND1P05546 499 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 MSL3P1P0C860 447 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 KRT6CP48668 564 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 OCRLQ01968 901 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 TUBB3Q13509 450 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 DDX39BQ13838 428 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 SGO1Q5FBB7 561 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 TCHHL1Q5QJ38 904 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 FRG2Q64ET8 278 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 ADNP2Q6IQ32 1131 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 RGS9BPQ6ZS82 235 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 RAB11FIP2Q7L804 512 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 CLYBLQ8N0X4 340 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 CHCHD4Q8N4Q1 142 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 WDR20Q8TBZ3 569 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 FRG2BQ96QU4 278 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 OR6C1Q96RD1 312 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 RHBGQ9H310 441 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 IRAK4Q9NWZ3 460 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 PTPRBP23467 1997 aa22.56■■□□□ 1.2
TSPAN4-203ENST00000397397 KIF26BQ2KJY2 2108 aa22.55■■□□□ 1.2
TSPAN4-203ENST00000397397 TMEM233B4DJY2 109 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms