RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SERPINB1P30740 379 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 GRIA3P42263 894 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 HNRNPKP61978 463 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 HYAL2Q12891 473 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 SF1Q15637 639 aaKnown RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 TMEM26Q6ZUK4 368 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 KANSL1Q7Z3B3 1105 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 FAM46DQ8NEK8 389 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 LMX1AQ8TE12 382 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 RAB3IPQ96QF0 476 aaPredicted RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 MS4A8Q9BY19 250 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 MRPL1Q9BYD6 325 aaKnown RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 NEUROG3Q9Y4Z2 214 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 NR5A2O00482 541 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 PPM1DO15297 605 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 CCNDBP1O95273 360 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 BCL6P41182 706 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 NUDT2P50583 147 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 DDX39BQ13838 428 aaKnown RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 SPIN4Q56A73 249 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 CACHD1Q5VU97 1274 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 METTL4Q8N3J2 472 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 SPDL1Q96EA4 605 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 LHX9Q9NQ69 397 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 RUVBL1Q9Y265 456 aaKnown RBP12.19□□□□□ -0.46
TRIM39-204ENST00000396548 SNX11Q9Y5W9 270 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 WDFY4Q6ZS81 3184 aa12.19□□□□□ -0.46
TRIM39-204ENST00000396548 A0A1B0GVT2 93 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 FXYD1O00168 92 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 UGT2B7P16662 529 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 RXRGP48443 463 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 PGAM4Q8N0Y7 254 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 KRTCAP2Q8N6L1 136 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 FAM13CQ8NE31 585 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 GPR156Q8NFN8 814 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 SLC22A18Q96BI1 424 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 APOLD1Q96LR9 279 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 SERPINI1Q99574 410 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 DPH7Q9BTV6 452 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 NDUFAF1Q9Y375 327 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 A0A1B0GTW7 788 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 OR6C74A6NCV1 312 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 PTX3P26022 381 aaPredicted RBP12.18□□□□□ -0.46
TRIM39-204ENST00000396548 CMPK1P30085 196 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 LSSP48449 732 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 HHEXQ03014 270 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 RPS6KA2Q15349 733 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 SLC5A12Q1EHB4 618 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ZNF528Q3MIS6 628 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 PAGE3Q5JUK9 113 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 FCRL6Q6DN72 434 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 BMP8AQ7Z5Y6 402 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 UBE3DQ7Z6J8 389 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ULK2Q8IYT8 1036 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 DEFB107AQ8IZN7 70 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 SLC25A45Q8N413 288 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ARL14Q8N4G2 192 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 DPP10Q8N608 796 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 C1orf52Q8N6N3 182 aaKnown RBP12.18□□□□□ -0.46
TRIM39-204ENST00000396548 GLB1L3Q8NCI6 653 aaPredicted RBP12.18□□□□□ -0.46
TRIM39-204ENST00000396548 VPS33AQ96AX1 596 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 TESCQ96BS2 214 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ROPN1LQ96C74 230 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 CLPTM1LQ96KA5 538 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 EGLN2Q96KS0 407 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ACTR10Q9NZ32 417 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 EXO1Q9UQ84 846 aaKnown RBP12.18□□□□□ -0.46
TRIM39-204ENST00000396548 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 VPS13AQ96RL7 3174 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 DYTNA2CJ06 578 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 OR2A25A4D2G3 310 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 A8MUI8 341 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 B4DGG1 531 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 TGFB1P01137 390 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 MAPK1P28482 360 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 PGM1P36871 562 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 MAZP56270 477 aaKnown RBP12.18□□□□□ -0.46
TRIM39-204ENST00000396548 C21orf59P57076 290 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 PHC1P78364 1004 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ADPRMQ3LIE5 342 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 TRIM48Q8IWZ4 208 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 PILRAQ9UKJ1 303 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 ENTPD2Q9Y5L3 495 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 CSNK1G3Q9Y6M4 447 aa12.18□□□□□ -0.46
TRIM39-204ENST00000396548 MDC1Q14676 2089 aaKnown RBP12.17□□□□□ -0.46
TRIM39-204ENST00000396548 MGRN1O60291 552 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 CLEC3AO75596 197 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 HOXB9P17482 250 aaPredicted RBP12.17□□□□□ -0.46
TRIM39-204ENST00000396548 RELAQ04206 551 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 RBBP5Q15291 538 aaKnown RBP12.17□□□□□ -0.46
TRIM39-204ENST00000396548 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 KHDRBS2Q5VWX1 349 aaKnown RBP12.17□□□□□ -0.46
TRIM39-204ENST00000396548 C16orf89Q6UX73 402 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 COMMD6Q7Z4G1 85 aa12.17□□□□□ -0.46
TRIM39-204ENST00000396548 MFSD9Q8NBP5 474 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms