RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 CSTF2P33240 577 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 KCNC4Q03721 635 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 KHDC1Q4VXA5 237 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 TMEM71Q6P5X7 295 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 TTC23LQ6PF05 361 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 TMEM220Q6QAJ8 160 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 FRA10AC1Q70Z53 315 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 DET1Q7L5Y6 550 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 ADGRG6Q86SQ4 1221 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 SYVN1Q86TM6 617 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 HMGCLL1Q8TB92 370 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 NAT14Q8WUY8 206 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 CLPTM1LQ96KA5 538 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 MARK4Q96L34 752 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 ZNF382Q96SR6 550 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 TUBB1Q9H4B7 451 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 DCLRE1BQ9H816 532 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 SEMA4BQ9NPR2 832 aaPredicted RBP16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 PTBP2Q9UKA9 531 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 TNPO3Q9Y5L0 923 aaKnown RBP16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 PTPN13Q12923 2485 aa16.84■□□□□ 0.29
TNFSF13-205ENST00000396545 A0A1B0GTL3 188 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 B4E171 279 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 LIN7AO14910 233 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 PIP5K1BO14986 540 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 MTX2O75431 263 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 CIB2O75838 187 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 S100BP04271 92 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 TSPAN7P41732 249 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 PKNOX1P55347 436 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 IRX1P78414 480 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 FAM219BQ5XKK7 198 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 ZNF761Q86XN6 746 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 BMPERQ8N8U9 685 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 ELMO1Q92556 727 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 HGH1Q9BTY7 390 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 SLC12A9Q9BXP2 914 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 ASPSCR1Q9BZE9 553 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 OCIAD1Q9NX40 245 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 NKX1-2Q9UD57 310 aaPredicted RBP16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 ZNF225Q9UK10 706 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 ASB1Q9Y576 335 aa16.83■□□□□ 0.28
TNFSF13-205ENST00000396545 VPS4BO75351 444 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 UROSP10746 265 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 CDKL1Q00532 357 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 HSPA14Q0VDF9 509 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 CLCA4Q14CN2 919 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 FBXO48Q5FWF7 155 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 DEFB107AQ8IZN7 70 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 OR10G6Q8NH81 332 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 UBTD2Q8WUN7 234 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 KCNA7Q96RP8 456 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 SLC38A3Q99624 504 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 AKTIPQ9H8T0 292 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 RMI1Q9H9A7 625 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 SLC39A1Q9NY26 324 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 ADAMTS6Q9UKP5 1117 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 PRPF19Q9UMS4 504 aaKnown RBP16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 L3MBTL1Q9Y468 752 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 NAV2Q8IVL1 2488 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 PIKFYVEQ9Y2I7 2098 aa16.82■□□□□ 0.28
TNFSF13-205ENST00000396545 TRBV23OR9-2A0A075B6M9 112 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 PABPN1LA6NDY0 278 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 OR2AG2A6NM03 316 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 TERTO14746 1132 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 DUX1O43812 170 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 PRR35P0CG20 571 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 VCLP18206 1134 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 GNAZP19086 355 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 CTSCP53634 463 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 RAB15P59190 212 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 ACTR3P61158 418 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 MAPRE2Q15555 327 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 WDR74Q6RFH5 385 aaPredicted RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 C16orf89Q6UX73 402 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 RIPOR1Q6ZS17 1223 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 FAM129CQ86XR2 697 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 AHCYL2Q96HN2 611 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 OR2AG1Q9H205 316 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 GEMIN8Q9NWZ8 242 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 UTP6Q9NYH9 597 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 ATXN10Q9UBB4 475 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 TBC1D29Q9UFV1 150 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 ZNHIT2Q9UHR6 403 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 PRKAB1Q9Y478 270 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 SLC5A10A0PJK1 596 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 A6NCN8 305 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 EFCAB7A8K855 629 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 SUV39H1O43463 412 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 KCNJ13O60928 360 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 ALDOCP09972 364 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 LIFP15018 202 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 PRDX3P30048 256 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 MRPL19P49406 292 aaKnown RBP16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 NUDT2P50583 147 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 AP1S2P56377 157 aa16.81■□□□□ 0.28
TNFSF13-205ENST00000396545 HHEXQ03014 270 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms