RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 BRINP2Q9C0B6 783 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A7Q9HAW7 530 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A10Q9HAW8 530 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 UGT1A8Q9HAW9 530 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 HEBP1Q9NRV9 189 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RPS6KB2Q9UBS0 482 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TIMM22Q9Y584 194 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PCDHGB7Q9Y5F8 929 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 NPIPB15A6NHN6 443 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ALDH4A1P30038 563 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 GJA4P35212 333 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SH3BP2P78314 561 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LCN8Q6JVE9 175 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LIPIQ6XZB0 460 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PDZD3Q86UT5 571 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR2L2Q8NH16 312 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 BHLHE41Q9C0J9 482 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SOHLH2Q9NX45 425 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SERTAD3Q9UJW9 196 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PNMA8BQ9ULN7 279 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 PCDHGB1Q9Y5G3 927 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 USP9YO00507 2555 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 AGAP14A8MT82 685 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 A8MX80 341 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 SCAMP3O14828 347 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FZD6O60353 706 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ERAL1O75616 437 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 C1GALT1C1LP0DN25 315 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ATP5A1P25705 553 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TPP2P29144 1249 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TIA1P31483 386 aaKnown RBP eCLIP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF460Q14592 562 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 KHDC1Q4VXA5 237 aaKnown RBP3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR2T5Q6IEZ7 315 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 LCTLQ6UWM7 567 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 ADAMTSL4Q6UY14 1074 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RD3Q7Z3Z2 195 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TDHQ8IZJ6 230 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 CAMKK1Q8N5S9 505 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR2T29Q8NH02 315 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 OR10G6Q8NH81 332 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 RNF217Q8TC41 542 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 TRPV5Q9NQA5 729 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 MCM8Q9UJA3 840 aa3.28□□□□□ -1.88
VPS13C-203ENST00000395896 FER1L5A0AVI2 2057 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM150CB9EJG8 249 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 H0YAE9 185 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 CHST10O43529 356 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 ABCB1P08183 1280 aaPredicted RBP3.28□□□□□ -1.89
VPS13C-203ENST00000395896 GLDCP23378 1020 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 GTF2E2P29084 291 aaKnown RBP3.28□□□□□ -1.89
VPS13C-203ENST00000395896 NANOGP8Q6NSW7 305 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 ZCCHC12Q6PEW1 402 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 GOLGA7Q7Z5G4 137 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 SLC22A15Q8IZD6 547 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 C9orf43Q8TAL5 461 aaPredicted RBP3.28□□□□□ -1.89
VPS13C-203ENST00000395896 ASB12Q8WXK4 309 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 GORASP2Q9H8Y8 452 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 NANOGQ9H9S0 305 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 ACSS1Q9NUB1 689 aaPredicted RBP3.28□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM30AQ9NV96 361 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF358Q9NW07 568 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 TUBA8Q9NY65 449 aaPredicted RBP3.28□□□□□ -1.89
VPS13C-203ENST00000395896 IFT52Q9Y366 437 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 STON1Q9Y6Q2 735 aa3.28□□□□□ -1.89
VPS13C-203ENST00000395896 IGF2RP11717 2491 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CSPG4Q6UVK1 2322 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 B3GALT2O43825 422 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CPSF4O95639 269 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ITPKAP23677 461 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RGS8P57771 180 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 C2orf80Q0P641 193 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 LRRC26Q2I0M4 334 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DOK6Q6PKX4 331 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CEP97Q8IW35 865 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RNF148Q8N7C7 305 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR10A6Q8NH74 314 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RIBC2Q9H4K1 309 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PRODH2Q9UF12 536 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PPM1HQ9ULR3 514 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 POLR3HQ9Y535 204 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SPO11Q9Y5K1 396 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SNX10Q9Y5X0 201 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 AP4B1Q9Y6B7 739 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 FOXD2O60548 495 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SLC16A8O95907 504 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CYP17A1P05093 508 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 FABP3P05413 133 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HBQ1P09105 142 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 UGT2B15P54855 530 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 IRF9Q00978 393 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TUBA3CQ13748 450 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RBM20Q5T481 1227 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HENMT1Q5T8I9 393 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PIANPQ8IYJ0 282 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 APCDD1Q8J025 514 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SPATA6LQ8N4H0 392 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR7A2PQ8NGA2 310 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 WDR48Q8TAF3 677 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms