RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 SP140Q13342 867 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 STK11Q15831 433 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 ZNF547Q8IVP9 402 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 GALNT6Q8NCL4 622 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 OR10G6Q8NH81 332 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 FIG4Q92562 907 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 GUCD1Q96NT3 240 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 GTPBP2Q9BX10 602 aaKnown RBP13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 TUBA8Q9NY65 449 aaPredicted RBP13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 TSC22D4Q9Y3Q8 395 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 AP4B1Q9Y6B7 739 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 SAP18O00422 153 aaKnown RBP13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 APBB3O95704 486 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 GBAP04062 536 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 HSD17B1P14061 328 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 GNSP15586 552 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 PSMA4P25789 261 aaKnown RBP13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 MAD2L1Q13257 205 aaPredicted RBP13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 IER5LQ5T953 404 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 GATA6Q92908 595 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 HIC2Q96JB3 615 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 SGK2Q9HBY8 427 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 BATF3Q9NR55 127 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
PPP3CA-202ENST00000394853 MAGEA13PA6NCF6 341 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 PSIP1O75475 530 aaKnown RBP13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 SMNDC1O75940 238 aaKnown RBP eCLIP13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 NDUFV2P19404 249 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 JAK1P23458 1154 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 CLCNKAP51800 687 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 KCNC3Q14003 757 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 KIAA0040Q15053 153 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 PDK3Q15120 406 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 CMPK2Q5EBM0 449 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 CATSPEREQ5SY80 951 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 GCNT7Q6ZNI0 430 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 TSPEARQ8WU66 669 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 TSACCQ96A04 125 aaPredicted RBP13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 MRGPRX1Q96LB2 322 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 UHRF1Q96T88 793 aaPredicted RBP13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 SLC29A3Q9BZD2 475 aa13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 RPF2Q9H7B2 306 aaKnown RBP13.52□□□□□ -0.24
PPP3CA-202ENST00000394853 ZNF217O75362 1048 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 PHC1P78364 1004 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 TMTC4Q5T4D3 741 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 GLYATQ6IB77 296 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 FAM83HQ6ZRV2 1179 aaPredicted RBP13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 NRSN1Q8IZ57 195 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 GTF2H4Q92759 462 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 NEIL2Q969S2 332 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 FBXL8Q96CD0 374 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 HSPA12BQ96MM6 686 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 INPP5KQ9BT40 448 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 LTB4R2Q9NPC1 389 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 ACTR3BQ9P1U1 418 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 SH2B3Q9UQQ2 575 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 CACNA1EQ15878 2313 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 KCNE1BA0A087WTH5 132 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 EPN2O95208 641 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 C1QCP02747 245 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 SDC1P18827 310 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 IL10P22301 178 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 TPMTP51580 245 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 COQ5Q5HYK3 327 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 RNF220Q5VTB9 566 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 TMEM53Q6P2H8 277 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 IYDQ6PHW0 289 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 LRRTM4Q86VH4 590 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 OR10Q1Q8NGQ4 319 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 ZNF480Q8WV37 535 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 RNF145Q96MT1 663 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 VCXQ9H320 206 aa13.52□□□□□ -0.25
PPP3CA-202ENST00000394853 MAGEB17A8MXT2 336 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 ISM1B1AKI9 464 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 SLC16A5O15375 505 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 PSMD7P51665 324 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 BNIP2Q12982 314 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 PWP1Q13610 501 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 IGSF11Q5DX21 431 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 OR4F3Q6IEY1 312 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 ZBTB49Q6ZSB9 765 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 OOSP2Q86WS3 158 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 RP1L1Q8IWN7 2480 aaPredicted RBP13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 AADATQ8N5Z0 425 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 ADCY4Q8NFM4 1077 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 AHCYL2Q96HN2 611 aaKnown RBP13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 C12orf66Q96MD2 445 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 CENPKQ9BS16 269 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 TRIM15Q9C019 465 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 TRIM39Q9HCM9 518 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 H0Y858 1186 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 ETHE1O95571 254 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 JUPP14923 745 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 S100A3P33764 101 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 TBPL1P62380 186 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 PRRT3Q5FWE3 981 aa13.51□□□□□ -0.25
PPP3CA-202ENST00000394853 UBALD2Q8IYN6 164 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms