RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 GABRB1P18505 474 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 APEX1P27695 318 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 HK3P52790 923 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ITGA1P56199 1179 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF273Q14593 569 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 EFCAB12Q6NXP0 572 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CRYBG2Q8N1P7 616 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 UTP15Q8TED0 518 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 RBPMSQ93062 196 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZC3HAV1LQ96H79 300 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF382Q96SR6 550 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 USB1Q9BQ65 265 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 C1QTNF3Q9BXJ4 246 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ULBP1Q9BZM6 244 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 DPY30Q9C005 99 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 DERL2Q9GZP9 239 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ELOVL6Q9H5J4 265 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZFP64Q9NPA5 681 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 TMEM184CQ9NVA4 438 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MALT1Q9UDY8 824 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 NEU3Q9UQ49 428 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 RLFQ13129 1914 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MROH6A6NGR9 719 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MATN3O15232 486 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 PROS1P07225 676 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ATXN8OSP0DMR3 200 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 SLC2A2P11168 524 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CCR1P32246 355 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CRYBB2P43320 205 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MAXP61244 160 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ABATP80404 500 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF33AQ06730 810 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CSTF3Q12996 717 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 BAMBIQ13145 260 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 HNRNPA0Q13151 305 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 RPA4Q13156 261 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 GRM7Q14831 915 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 SLC39A12Q504Y0 691 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 KLHL12Q53G59 568 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CLLU1Q5K131 121 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 TRIQKQ629K1 86 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 LURAP1LQ8IV03 231 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZZZ3Q8IYH5 903 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 SLC34A3Q8N130 599 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 LIX1Q8N485 282 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 DUSP18Q8NEJ0 188 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 OR11H4Q8NGC9 324 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 OR6C4Q8NGE1 309 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 OR8K5Q8NH50 307 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 C9orf43Q8TAL5 461 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CREB3L4Q8TEY5 395 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 KLHL6Q8WZ60 621 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 EDEM1Q92611 657 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ULK4Q96C45 1275 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 HSH2DQ96JZ2 352 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 FAM167AQ96KS9 214 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 LINC00052Q96N35 136 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 FEVQ99581 238 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 FDXACB1Q9BRP7 624 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MARVELD1Q9BSK0 173 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 INPP5KQ9BT40 448 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 AARSD1Q9BTE6 412 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 DPCDQ9BVM2 203 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 CDCA4Q9BXL8 241 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MS4A7Q9GZW8 240 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 NXF3Q9H4D5 531 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 WDCPQ9H6R7 721 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 IFT22Q9H7X7 185 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 POPDC3Q9HBV1 291 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ARNT2Q9HBZ2 717 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 FARSBQ9NSD9 589 aaKnown RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 FAM105AQ9NUU6 356 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF219Q9P2Y4 722 aaPredicted RBP6.94□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF112Q9UJU3 913 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 GJD2Q9UKL4 321 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 MED16Q9Y2X0 877 aa6.94□□□□□ -1.3
NPHP1-203ENST00000393272 TP53BP1Q12888 1972 aaPredicted RBP6.93□□□□□ -1.3
NPHP1-203ENST00000393272 ARPC4-TTLL3A0A0A6YYG9 625 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 GABRDO14764 452 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 LYRM1O43325 122 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 ORC5O43913 435 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 RHOBTB1O94844 696 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 CDRT1O95170 752 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 MPC2O95563 127 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 ESR1P03372 595 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 IL6P05231 212 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 SCG5P05408 212 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 FCER2P06734 321 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 CDKN2CP42773 168 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 PIK3CGP48736 1102 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 TPMTP51580 245 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 IHHQ14623 411 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 IGSF11Q5DX21 431 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 DENND1CQ8IV53 801 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 SULF1Q8IWU6 871 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 TAGAPQ8N103 731 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 Q8N402 240 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 C19orf18Q8NEA5 215 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 REPS2Q8NFH8 660 aa6.93□□□□□ -1.3
NPHP1-203ENST00000393272 CEP76Q8TAP6 659 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms