RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 SLCO4A1Q96BD0 722 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 FUNDC2Q9BWH2 189 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 KCNK12Q9HB15 430 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 GLTPQ9NZD2 209 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 SNX7Q9UNH6 387 aa18.38■□□□□ 0.53
CCDC50-202ENST00000392456 TSPAN4O14817 238 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ASGR2P07307 311 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 CHRNGP07510 517 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 CYP2A6P11509 494 aaPredicted RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 YAP1P46937 504 aaKnown RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 TOP3AQ13472 1001 aaPredicted RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF648Q5T619 568 aaPredicted RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 FAM219BQ5XKK7 198 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ARSKQ6UWY0 536 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 LENG8Q96PV6 779 aaPredicted RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 C19orf43Q9BQ61 176 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 IFT80Q9P2H3 777 aaPredicted RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 PCDHGA7Q9Y5G6 932 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF106Q9H2Y7 1883 aaKnown RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 A8MUA0 341 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 SULT1B1O43704 296 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF780AO75290 641 aaPredicted RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ESR1P03372 595 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 YES1P07947 543 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 PSKH1P11801 424 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 ITGB7P26010 798 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 PSMD8P48556 350 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 IL1RL1Q01638 556 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 FAM214AQ32MH5 1076 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 PGAM4Q8N0Y7 254 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 CSGALNACT1Q8TDX6 532 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 KCNJ9Q92806 393 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.37■□□□□ 0.531e-6■■■■■ 31.4
CCDC50-202ENST00000392456 PHF21BQ96EK2 531 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 DACH2Q96NX9 599 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 RIOK2Q9BVS4 552 aaKnown RBP18.37■□□□□ 0.53
CCDC50-202ENST00000392456 FAM83DQ9H4H8 585 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 KLF15Q9UIH9 416 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 VPS9D1Q9Y2B5 631 aa18.37■□□□□ 0.53
CCDC50-202ENST00000392456 CDC7O00311 574 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 SYNCRIPO60506 623 aaKnown RBP18.36■□□□□ 0.53
CCDC50-202ENST00000392456 ADAM11O75078 769 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 APOA4P06727 396 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 HOXB3P14651 431 aaPredicted RBP18.36■□□□□ 0.53
CCDC50-202ENST00000392456 CD1EP15812 388 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF30P17039 623 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 ZNF7P17097 686 aaPredicted RBP18.36■□□□□ 0.53
CCDC50-202ENST00000392456 CTHP32929 405 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 GPR33Q49SQ1 333 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 FAM209BQ5JX69 171 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 KIAA1211LQ6NV74 962 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 PLEKHM3Q6ZWE6 761 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 Q7L0L9 218 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 VN1R5Q7Z5H4 357 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 TECPR1Q7Z6L1 1165 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 RBFAQ8N0V3 343 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 EXT2Q93063 718 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 FUBP1Q96AE4 644 aaKnown RBP18.36■□□□□ 0.53
CCDC50-202ENST00000392456 FBXL20Q96IG2 436 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 CD320Q9NPF0 282 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 SLC35C2Q9NQQ7 365 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 SNX8Q9Y5X2 465 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 CACNG2Q9Y698 323 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 PMF1-BGLAPU3KQ54 211 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 USP34Q70CQ2 3546 aa18.36■□□□□ 0.53
CCDC50-202ENST00000392456 CLIC3O95833 236 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 IFNA16P05015 189 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 ELFN1P0C7U0 828 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 ADRB3P13945 408 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 CYP2A7P20853 494 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 SEPHS1P49903 392 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 ABCE1P61221 599 aaKnown RBP18.35■□□□□ 0.53
CCDC50-202ENST00000392456 DBPQ10586 325 aaPredicted RBP18.35■□□□□ 0.53
CCDC50-202ENST00000392456 CTF1Q16619 201 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 TBRG1Q3YBR2 411 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 FBXO48Q5FWF7 155 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 LIPMQ5VYY2 423 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 PTRHD1Q6GMV3 140 aaKnown RBP18.35■□□□□ 0.53
CCDC50-202ENST00000392456 UBQLNLQ8IYU4 475 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 SLC44A3Q8N4M1 653 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 AGR3Q8TD06 166 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 POPDC3Q9HBV1 291 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 PRDM8Q9NQV8 689 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 ZC4H2Q9NQZ6 224 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 FAM8A1Q9UBU6 413 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 PLXNB3Q9ULL4 1909 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 NUMA1Q14980 2115 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 E5RI56 91 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 CFLARO15519 480 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 VPS26AO75436 327 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 SERPINI2O75830 405 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 EGFP01133 1207 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 HMGN1P05114 100 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 RHDQ02161 417 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 ENPP2Q13822 863 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 TMEM65Q6PI78 240 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 SPATC1Q76KD6 591 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 DET1Q7L5Y6 550 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 NOXA1Q86UR1 476 aa18.35■□□□□ 0.53
CCDC50-202ENST00000392456 HORMAD1Q86X24 394 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms