RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 XKR8Q9H6D3 395 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 SERHLQ9NQF3 203 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 GPR27Q9NS67 375 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 VAPAQ9P0L0 249 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 ACTR3BQ9P1U1 418 aa11□□□□□ -0.65
SMARCAL1-203ENST00000392128 GMPR2Q9P2T1 348 aaKnown RBP11□□□□□ -0.65
SMARCAL1-203ENST00000392128 A0A096LPI6 279 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRBV5-3A0A0A0MS03 114 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 A6NCN8 305 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRICKLE3O43900 615 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PCDH7O60245 1069 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 RASGRP1O95267 797 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 TGFB1P01137 390 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ANXA4P09525 319 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PTX3P26022 381 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ACTR1BP42025 376 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 KIR3DL1P43629 444 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ACTR1AP61163 376 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 UGT8Q16880 541 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 LCN8Q6JVE9 175 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ARMCX6Q7L4S7 300 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 GPR180Q86V85 440 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ADHFE1Q8IWW8 467 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC22A18ASQ8N1D0 253 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 METTL4Q8N3J2 472 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 GPR156Q8NFN8 814 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR8J2Q8NGG1 315 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR2A1Q8NGT9 310 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ITCHQ96J02 903 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 LRGUKQ96M69 825 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 CXorf56Q9H5V9 222 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 C6orf203Q9P0P8 240 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 LRRC42Q9Y546 428 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRIOO75962 3097 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 IGHV1OR15-9A0A0B4J2B8 117 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 A0A1W2PPC4 97 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 AQP12BA6NM10 295 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 FAM170BA6NMN3 283 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 DFNA5O60443 496 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 SH3BGRLO75368 114 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 EML2O95834 649 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 HTR1EP28566 365 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 MLLT1Q03111 559 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 RBBP5Q15291 538 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 SF1Q15637 639 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PGS1Q32NB8 556 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 IRAK1BP1Q5VVH5 260 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 COMMD6Q7Z4G1 85 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 CAMKMTQ7Z624 323 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 AQP12AQ8IXF9 295 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PHACTR4Q8IZ21 702 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 GOLM1Q8NBJ4 401 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 CCL4L1Q8NHW4 92 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 FAM174AQ8TBP5 190 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 GFM2Q969S9 779 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 SH3GL1Q99961 368 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PAIP1Q9H074 479 aaKnown RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR51B5Q9H339 312 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC25A37Q9NYZ2 338 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 FBXL21Q9UKT6 434 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 AP3M1Q9Y2T2 418 aa10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.99□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRSS51A0A1B0GVH4 220 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ANKDD1BA6NHY2 528 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 H7BY64 318 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 CASQ2O14958 399 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SCAMP2O15127 329 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 NVLO15381 856 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 AKAP10O43572 662 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SEMA3DO95025 777 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 TNFP01375 233 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 F3P13726 295 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 COX7A2P14406 83 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 HOXB9P17482 250 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ATP6V1B2P21281 511 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SHMT2P34897 504 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 MTPNP58546 118 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 CSNK1G2P78368 415 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ABATP80404 500 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZNF763Q0D2J5 394 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SELPLGQ14242 412 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 RUNDC3AQ59EK9 446 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC30A9Q6PML9 568 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 NRROSQ86YC3 692 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 TMEM126BQ8IUX1 230 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 MSRB3Q8IXL7 192 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PQLC1Q8N2U9 271 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ANKRD53Q8N9V6 530 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 CXorf40BQ96DE9 158 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRAP1Q96NZ9 151 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ORAI3Q9BRQ5 295 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 FOXQ1Q9C009 403 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 CHRDQ9H2X0 955 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 FAM120CQ9NX05 1096 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR6C2Q9NZP2 312 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZNF624Q9P2J8 865 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 MCM8Q9UJA3 840 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SNX13Q9Y5W8 968 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms