RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 KRT6AP02538 564 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 KRT6BP04259 564 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 IGFBP1P08833 259 aaPredicted RBP17.4■□□□□ 0.38
ERCC2-201ENST00000391941 KRT6CP48668 564 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 SLC11A2P49281 568 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 DMC1Q14565 340 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 C5orf22Q49AR2 442 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 CYP2U1Q7Z449 544 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 STX19Q8N4C7 294 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 OR4K1Q8NGD4 311 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 CCNB1IP1Q9NPC3 277 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 FZD4Q9ULV1 537 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 N6AMT1Q9Y5N5 214 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 CCDC88CQ9P219 2028 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 CLDN24A6NM45 220 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 SLC38A8A6NNN8 435 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 KIAA0513O60268 411 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 TBL1XO60907 577 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 STC2O76061 302 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 ETHE1O95571 254 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 AKR1A1P14550 325 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 S100A5P33763 92 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 NKX3-2P78367 333 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 DSC1Q08554 894 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 FADDQ13158 208 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 TSTQ16762 297 aaKnown RBP17.4■□□□□ 0.38
ERCC2-201ENST00000391941 HKDC1Q2TB90 917 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 THOC7Q6I9Y2 204 aaKnown RBP17.4■□□□□ 0.38
ERCC2-201ENST00000391941 GPR26Q8NDV2 337 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 EFHD2Q96C19 240 aaPredicted RBP17.4■□□□□ 0.38
ERCC2-201ENST00000391941 SIGLEC11Q96RL6 698 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 SLC22A12Q96S37 553 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 CPNE5Q9HCH3 593 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 MS4A12Q9NXJ0 267 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 PSORS1C1Q9UIG5 152 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 DNMT3LQ9UJW3 386 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 TRPM7Q96QT4 1865 aa17.4■□□□□ 0.38
ERCC2-201ENST00000391941 PRAMEF25A6NGN4 478 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 TMEM229AB2RXF0 380 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 SAP18O00422 153 aaKnown RBP17.39■□□□□ 0.37
ERCC2-201ENST00000391941 DYRK3O43781 588 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 EPN2O95208 641 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 SOX3P41225 446 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 KCNJ10P78508 379 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 MXD1Q05195 221 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CDC20Q12834 499 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 MBTPS1Q14703 1052 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 IQCCQ4KMZ1 466 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 MFSD14CQ5VZR4 134 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 UBE2R2Q712K3 238 aaPredicted RBP17.39■□□□□ 0.37
ERCC2-201ENST00000391941 WDR53Q7Z5U6 358 aaPredicted RBP17.39■□□□□ 0.37
ERCC2-201ENST00000391941 DNAJC22Q8N4W6 341 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 OR5AK3PQ8NH89 298 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 MYO19Q96H55 970 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 P2RY13Q9BPV8 354 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CCM2Q9BSQ5 444 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 NUAK2Q9H093 628 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 MMP27Q9H306 513 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 SP140LQ9H930 580 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 TPT1P8Q9HAU6 139 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 ZNF226Q9NYT6 803 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CLEC4EQ9ULY5 219 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 GCM2O75603 506 aaPredicted RBP17.39■□□□□ 0.37
ERCC2-201ENST00000391941 FHP07954 510 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CD22P20273 847 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CSKP41240 450 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 LEXMQ3ZCV2 418 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 SLC46A3Q7Z3Q1 461 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 RBFAQ8N0V3 343 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CHCHD4Q8N4Q1 142 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 IL17RDQ8NFM7 739 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 NELL1Q92832 810 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 C7orf34Q96L11 122 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 CEP295NLQ96MC4 621 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 IL4I1Q96RQ9 567 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 MMP28Q9H239 520 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 IFT52Q9Y366 437 aa17.39■□□□□ 0.37
ERCC2-201ENST00000391941 ILVBLA1L0T0 632 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 DUSP11O75319 330 aaKnown RBP17.38■□□□□ 0.37
ERCC2-201ENST00000391941 CLDN11O75508 207 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 ACRV1P26436 265 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 HNRNPFP52597 415 aaKnown RBP17.38■□□□□ 0.37
ERCC2-201ENST00000391941 TSTA3Q13630 321 aaPredicted RBP17.38■□□□□ 0.37
ERCC2-201ENST00000391941 KCNA10Q16322 511 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 ATAD3CQ5T2N8 411 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 IER5LQ5T953 404 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 LACC1Q8IV20 430 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 KIAA1958Q8N8K9 716 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 TBC1D20Q96BZ9 403 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 SPATA17Q96L03 361 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 MUTYHQ9UIF7 546 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 GLYATL1P3A0A0U1RQE8 302 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 ANKRD34BA5PLL1 514 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 TNFRSF11BO00300 401 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 C9P02748 559 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 HLA-EP13747 358 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 ETFAP13804 333 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 AMD1P17707 334 aa17.38■□□□□ 0.37
ERCC2-201ENST00000391941 RGS6P49758 472 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms