RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 COL9A2Q14055 689 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 RBBP5Q15291 538 aaKnown RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 PRAMEF17Q5VTA0 474 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 LIPJQ5W064 366 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 LETMD1Q6P1Q0 360 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 TMIGD1Q6UXZ0 262 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 VN1R4Q7Z5H5 301 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 MILR1Q7Z6M3 343 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 SYVN1Q86TM6 617 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 KRT78Q8N1N4 520 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 MFSD9Q8NBP5 474 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 OR4F6Q8NGB9 312 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 N4BP2L2Q92802 583 aaPredicted RBP12.11□□□□□ -0.47
SMN1-202ENST00000380707 USP7Q93009 1102 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 RNF31Q96EP0 1072 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ZNF285Q96NJ3 590 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 SLC46A1Q96NT5 459 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 ZNF382Q96SR6 550 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 MACROD1Q9BQ69 325 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 FANCEQ9HB96 536 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 SERTAD3Q9UJW9 196 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 RARRES3Q9UL19 164 aa12.11□□□□□ -0.47
SMN1-202ENST00000380707 SPTBP11277 2137 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 MDC1Q14676 2089 aaKnown RBP12.1□□□□□ -0.47
SMN1-202ENST00000380707 TRABD2BA6NFA1 517 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 C9orf172C9J069 976 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 P2RX6O15547 441 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 SRPX2O60687 465 aaPredicted RBP12.1□□□□□ -0.47
SMN1-202ENST00000380707 UGDHO60701 494 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 OR2B3O76000 313 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 TIAF1O95411 115 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 MLYCDO95822 493 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 NR1D1P20393 614 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 BGNP21810 368 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 ARRB2P32121 409 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 HNF4AP41235 474 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 ITGA1P56199 1179 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 RAB15P59190 212 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 NAA20P61599 178 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 LAPTM5Q13571 262 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 CHI3L2Q15782 390 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMN1-202ENST00000380707 HKDC1Q2TB90 917 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 PAGE2BQ5JRK9 111 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 WASHC2DQ5SRD0 308 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 DCAF12Q5T6F0 453 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 ADNP2Q6IQ32 1131 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 GRHL2Q6ISB3 625 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 PWWP2BQ6NUJ5 590 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 ATG14Q6ZNE5 492 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 PPP1R3BQ86XI6 285 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 LSMEM2Q8N112 164 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 SREK1Q8WXA9 508 aaKnown RBP12.1□□□□□ -0.47
SMN1-202ENST00000380707 RERGQ96A58 199 aaPredicted RBP12.1□□□□□ -0.47
SMN1-202ENST00000380707 TM4SF19Q96DZ7 209 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 CNDP1Q96KN2 507 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 TAAR9Q96RI9 348 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 SHCBP1LQ9BZQ2 653 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 NRSN2Q9GZP1 204 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 TNFRSF12AQ9NP84 129 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 MSRB2Q9Y3D2 182 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 NEUROG3Q9Y4Z2 214 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 B3GALT1Q9Y5Z6 326 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 AP1M2Q9Y6Q5 423 aa12.1□□□□□ -0.47
SMN1-202ENST00000380707 H0YIV9 168 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 NPHS1O60500 1241 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 OR4F21O95013 312 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 ESRRBO95718 433 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 CHN1P15882 459 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 AHRP35869 848 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 RTP5Q14D33 572 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 HIST2H2ACQ16777 129 aaPredicted RBP12.09□□□□□ -0.47
SMN1-202ENST00000380707 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMN1-202ENST00000380707 ARL13AQ5H913 290 aaPredicted RBP12.09□□□□□ -0.47
SMN1-202ENST00000380707 TCTE1Q5JU00 501 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 HIST2H2AA3Q6FI13 130 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 CEACAM20Q6UY09 585 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 GPRIN3Q6ZVF9 776 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 VN1R5Q7Z5H4 357 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 BPHLQ86WA6 291 aaPredicted RBP12.09□□□□□ -0.47
SMN1-202ENST00000380707 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMN1-202ENST00000380707 LAS2Q8IYD9 372 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 TBC1D19Q8N5T2 526 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 CSNK1A1LQ8N752 337 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 OR7G3Q8NG95 312 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 OR8K5Q8NH50 307 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 CREB3L4Q8TEY5 395 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 AGAP11Q8TF27 550 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 SLC13A3Q8WWT9 602 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 THAP11Q96EK4 314 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 DDA1Q9BW61 102 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 ASPSCR1Q9BZE9 553 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 PITHD1Q9GZP4 211 aaPredicted RBP12.09□□□□□ -0.47
SMN1-202ENST00000380707 DRC3Q9H069 523 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 NT5DC2Q9H857 520 aa12.09□□□□□ -0.47
SMN1-202ENST00000380707 ZNF395Q9H8N7 513 aaPredicted RBP12.09□□□□□ -0.47
SMN1-202ENST00000380707 MID1IP1Q9NPA3 183 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms