RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.29□□□□□ -0.6
DDR1-227ENST00000376570 ADPRHL2Q9NX46 363 aa11.29□□□□□ -0.6
DDR1-227ENST00000376570 PRSS51A0A1B0GVH4 220 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 FXYD1O00168 92 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 KPNA4O00629 521 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 MID1O15344 667 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 FRS3O43559 492 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 TSPAN12O95859 305 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 ADH1CP00326 375 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 TCF3P15923 654 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 PFKLP17858 780 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 CR2P20023 1033 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 SERPINB1P30740 379 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 RRM2P31350 389 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 RXRGP48443 463 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 DAG1Q14118 895 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 PON2Q15165 354 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 TYSND1Q2T9J0 566 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 MED27Q6P2C8 311 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 ADGRG6Q86SQ4 1221 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 C12orf40Q86WS4 652 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 FAM217AQ8IXS0 508 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 WDR48Q8TAF3 677 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 FIBINQ8TAL6 211 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 LZICQ8WZA0 190 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 SLC9A6Q92581 669 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 GLYATL1Q969I3 302 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 TMEM203Q969S6 136 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 RHNO1Q9BSD3 238 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 RAD21L1Q9H4I0 556 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 SLC28A3Q9HAS3 691 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 BLOC1S6Q9UL45 172 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 PSMD11O00231 422 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 STX16O14662 325 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 NADKO95544 446 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 RAP2AP10114 183 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 HOXC5Q00444 222 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 C1orf61Q13536 156 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 BEND5Q7L4P6 421 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 THAP5Q7Z6K1 395 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 COX4I2Q96KJ9 171 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 SLC35A5Q9BS91 424 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 NUSAP1Q9BXS6 441 aaKnown RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 CCDC177Q9NQR7 707 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 SACM1LQ9NTJ5 587 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 C3orf18Q9UK00 162 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 SLC9A8Q9Y2E8 581 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 PCDHB3Q9Y5E6 796 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 CEPT1Q9Y6K0 416 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 PPM1DO15297 605 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 CDC123O75794 336 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 ATE1O95260 518 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 CTSAP10619 480 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 ACADMP11310 421 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 C6P13671 934 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 ZNF26P17031 533 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 PAX3P23760 479 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 VIPR1P32241 457 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 OLR1P78380 273 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 CYP2A13Q16696 494 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 GPR33Q49SQ1 333 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 GPR65Q8IYL9 337 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 DTX3Q8N9I9 347 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 ISL2Q96A47 359 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 BARD1Q99728 777 aaKnown RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
DDR1-227ENST00000376570 MTIF3Q9H2K0 278 aaKnown RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 EP300Q09472 2414 aaPredicted RBP11.28□□□□□ -0.6
DDR1-227ENST00000376570 HEPACAM2A8MVW5 462 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 CACNG3O60359 315 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 BCHEP06276 602 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 RFC2P35250 354 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 GRK3P35626 688 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 CTSKP43235 329 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 CDK9P50750 372 aaKnown RBP11.27□□□□□ -0.6
DDR1-227ENST00000376570 CAMK1Q14012 370 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 RUNDC3AQ59EK9 446 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 NANOGNBQ7Z5D8 188 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 NAGSQ8N159 534 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 CPA6Q8N4T0 437 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 METTL27Q8N6F8 245 aaPredicted RBP11.27□□□□□ -0.6
DDR1-227ENST00000376570 TTC29Q8NA56 475 aaPredicted RBP11.27□□□□□ -0.6
DDR1-227ENST00000376570 GPR150Q8NGU9 434 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 CHFRQ96EP1 664 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 FCRL4Q96PJ5 515 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 ABCG2Q9UNQ0 655 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 OARD1Q9Y530 152 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.6
DDR1-227ENST00000376570 FADS2P1A8MWK0 482 aa11.27□□□□□ -0.61
DDR1-227ENST00000376570 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
DDR1-227ENST00000376570 DENRO43583 198 aaKnown RBP11.27□□□□□ -0.61
DDR1-227ENST00000376570 MFN2O95140 757 aa11.27□□□□□ -0.61
DDR1-227ENST00000376570 GPIP06744 558 aa11.27□□□□□ -0.61
DDR1-227ENST00000376570 TIMP2P16035 220 aa11.27□□□□□ -0.61
DDR1-227ENST00000376570 SHMT2P34897 504 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms