RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ATF6P18850 670 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 TNFRSF1BP20333 461 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 CRYBA2P53672 197 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 CHRNA6Q15825 494 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 DUOXA1Q1HG43 343 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 IQCCQ4KMZ1 466 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 CBLL1Q75N03 491 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 EIF3MQ7L2H7 374 aaKnown RBP13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 TESCQ96BS2 214 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 ZNF689Q96CS4 500 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 ZNF486Q96H40 463 aaPredicted RBP13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 CHCHD6Q9BRQ6 235 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 SLC29A3Q9BZD2 475 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 RUBCNLQ9H714 662 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 RAD18Q9NS91 495 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 UGT2A1Q9Y4X1 527 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 SAGE2PA6NJ88 616 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 SLC38A8A6NNN8 435 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 FAM47E-STBD1D6RA91 191 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 SYN3O14994 580 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 PRAMEF4O60810 478 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 C9P02748 559 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 HSMCR30P0CW71 290 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 S100A1P23297 94 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 RPS3P23396 243 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 RRM2P31350 389 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 TP53BP2Q13625 1128 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 PRAMEF9Q5VWM5 478 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 NOXRED1Q6NXP6 359 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 RNF165Q6ZSG1 346 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 USP43Q70EL4 1123 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 SLC46A3Q7Z3Q1 461 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 ELMOD1Q8N336 334 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 UBTD2Q8WUN7 234 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 PIH1D2Q8WWB5 315 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 NELL1Q92832 810 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 HRASLS5Q96KN8 279 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 C7orf34Q96L11 122 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 SLC32A1Q9H598 525 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 ZFYVE1Q9HBF4 777 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 ANKHQ9HCJ1 492 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 TAS2R16Q9NYV7 291 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 CRLS1Q9UJA2 301 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 NOX1Q9Y5S8 564 aa13.65□□□□□ -0.22
CLCNKA-202ENST00000375692 DYRK3O43781 588 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 MRPS14O60783 128 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ANXA5P08758 320 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 HOXB6P17509 224 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ACRV1P26436 265 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 IDH2P48735 452 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 TRPC1P48995 793 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 CASP9P55211 416 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ITGA1P56199 1179 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 WNT3P56703 355 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 COPZ1P61923 177 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ELP6Q0PNE2 266 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 UGT8Q16880 541 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 PNCKQ6P2M8 343 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 FAM124AQ86V42 546 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 AMER2Q8N7J2 671 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 OR52J3Q8NH60 311 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ZNF675Q8TD23 568 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 SKA2Q8WVK7 121 aaPredicted RBP13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 AUTS2Q8WXX7 1259 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 IGSF21Q96ID5 467 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 FEVQ99581 238 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 RLIMQ9NVW2 624 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 SLC6A14Q9UN76 642 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 MAGEB17A8MXT2 336 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 GFRA2O00451 464 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 HAT1O14929 419 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 COCHO43405 550 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 SH3BGRLO75368 114 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 EPN2O95208 641 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 PTHP01270 115 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 BPIP17213 487 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ITGALP20701 1170 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 S100A5P33763 92 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 ARMC12Q5T9G4 340 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 NEK5Q6P3R8 708 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 TUBA3EQ6PEY2 450 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 CCDC80Q76M96 950 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 DNAJC22Q8N4W6 341 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 CMTM7Q96FZ5 175 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 MYO19Q96H55 970 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 TMEM175Q9BSA9 504 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 RC3H2Q9HBD1 1191 aaKnown RBP13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 NEK6Q9HC98 313 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 C14orf119Q9NWQ9 140 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 BTBD3Q9Y2F9 522 aa13.64□□□□□ -0.23
CLCNKA-202ENST00000375692 KCNE1BA0A087WTH5 132 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 A0A1B0GVM2 712 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 KMOO15229 486 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 SCN2BO60939 215 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 STC2O76061 302 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 CDK1P06493 297 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 AMD1P17707 334 aa13.63□□□□□ -0.23
CLCNKA-202ENST00000375692 GPX2P18283 190 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms